Salmo trutta (river trout): 115176237
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Entry
115176237 CDS
T08542
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
KO
K06752
MHC class II antigen
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
stru04514
Cell adhesion molecules
stru04672
Intestinal immune network for IgA production
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115176237
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115176237
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115176237
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115176237
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115176237
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115176237
Exosomal proteins of epithelial cells
115176237
Exosomal proteins of breast milk
115176237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
ig
Ig_2
I-set
C2-set_2
C2-set_3
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
115176237
NCBI-ProteinID:
XP_029591961
Ensembl:
ENSSTUG00000034227
LinkDB
All DBs
Position
36:complement(504310..507170)
Genome browser
AA seq
242 aa
AA seq
DB search
MSLCCLNMKLSVIVLILCCQVYAEDKVLHIDLYVSGCSDSDGVGVFGLDGEEKWYADFNK
GKGVVVQPPFSDPLNYDRFYEHAVGSQEILKANLAKCIKAYKNPPEKIVPPHSSIYPRDD
VELGVENTLICHVSGFFPPPVRVRWTRNNQNVTEGVRLSTPYPNADVTFNQFSSLPFTPE
EGDIYSCTVEHKGLTETLTRIWEPEVSQPSVGPAVFCGVGLTLGLLGVATGTFFLIKGNQ
CN
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctgttgtctgaacatgaagctctctgtgattgtcctcatcctctgctgtcag
gtgtatgcagaagacaaagttctgcatattgatttatatgttagtggatgcagtgattca
gatggagtgggtgtgtttggactggatggggaagagaagtggtacgcagacttcaacaaa
gggaagggagtggtggtacagcctcctttttcagatccattgaactacgacagattttat
gaacatgctgtaggtagtcaggagattttgaaagcaaacctggccaaatgtataaaagct
tacaagaacccaccagagaaaatagtccctcctcacagcagcatctaccccagggatgat
gtggagctcggggtggagaacaccctcatctgccacgtcagtgggttcttccctccacca
gtcagagtcaggtggaccaggaacaatcagaatgtgacagagggagtgcgtctcagcacc
ccctatcccaacgctgatgtcaccttcaaccagttctccagtctgcccttcaccccagag
gagggagacatctatagctgtactgtggagcacaagggccttactgagaccctgacacgg
atctgggaacctgaggtgagtcagcccagtgtgggtcctgctgtgttctgtggtgtgggt
ctgactctggggctgctgggagtggctaccggaacattcttcctcatcaaaggaaaccag
tgcaactga
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integrated database retrieval system