KEGG   Salmo trutta (river trout): 115176237
Entry
115176237         CDS       T08542                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
stru  Salmo trutta (river trout)
Pathway
stru04145  Phagosome
stru04514  Cell adhesion molecules
stru04672  Intestinal immune network for IgA production
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115176237
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115176237
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115176237
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115176237
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115176237
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115176237
  Exosomal proteins of epithelial cells
   115176237
  Exosomal proteins of breast milk
   115176237
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 ig Ig_2 I-set C2-set_2 C2-set_3 Intein_splicing
Other DBs
NCBI-GeneID: 115176237
NCBI-ProteinID: XP_029591961
Ensembl: ENSSTUG00000034227
LinkDB
Position
36:complement(504310..507170)
AA seq 242 aa
MSLCCLNMKLSVIVLILCCQVYAEDKVLHIDLYVSGCSDSDGVGVFGLDGEEKWYADFNK
GKGVVVQPPFSDPLNYDRFYEHAVGSQEILKANLAKCIKAYKNPPEKIVPPHSSIYPRDD
VELGVENTLICHVSGFFPPPVRVRWTRNNQNVTEGVRLSTPYPNADVTFNQFSSLPFTPE
EGDIYSCTVEHKGLTETLTRIWEPEVSQPSVGPAVFCGVGLTLGLLGVATGTFFLIKGNQ
CN
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtctctctgttgtctgaacatgaagctctctgtgattgtcctcatcctctgctgtcag
gtgtatgcagaagacaaagttctgcatattgatttatatgttagtggatgcagtgattca
gatggagtgggtgtgtttggactggatggggaagagaagtggtacgcagacttcaacaaa
gggaagggagtggtggtacagcctcctttttcagatccattgaactacgacagattttat
gaacatgctgtaggtagtcaggagattttgaaagcaaacctggccaaatgtataaaagct
tacaagaacccaccagagaaaatagtccctcctcacagcagcatctaccccagggatgat
gtggagctcggggtggagaacaccctcatctgccacgtcagtgggttcttccctccacca
gtcagagtcaggtggaccaggaacaatcagaatgtgacagagggagtgcgtctcagcacc
ccctatcccaacgctgatgtcaccttcaaccagttctccagtctgcccttcaccccagag
gagggagacatctatagctgtactgtggagcacaagggccttactgagaccctgacacgg
atctgggaacctgaggtgagtcagcccagtgtgggtcctgctgtgttctgtggtgtgggt
ctgactctggggctgctgggagtggctaccggaacattcttcctcatcaaaggaaaccag
tgcaactga

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