Salmo trutta (river trout): 115176380
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Entry
115176380 CDS
T08542
Name
(RefSeq) T-cell surface glycoprotein CD4-like isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03250
Viral life cycle - HIV-1
stru03260
Virion - Human immunodeficiency virus
stru04060
Cytokine-cytokine receptor interaction
stru04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115176380
03260 Virion - Human immunodeficiency virus
115176380
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115176380
04514 Cell adhesion molecule (CAM) interaction
115176380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115176380
CD molecules [BR:
stru04090
]
Proteins
115176380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
I-set
Ig_2
Sp38
Motif
Other DBs
NCBI-GeneID:
115176380
NCBI-ProteinID:
XP_029592242
Ensembl:
ENSSTUG00000002816
LinkDB
All DBs
Position
3:complement(46826158..46844650)
Genome browser
AA seq
510 aa
AA seq
DB search
MTIASRLIQLLLHIVFRRSYKMKYVSGYLSIVIALFISSTGAENVVYGQVGGTVTLPVLK
QGSERVLVQWYFGMNTQPLITRNAQGRETIDSQWKDRLSLSKTDFSLIINKIRLEDFKSF
KCELKDFWPQQMTSVTTFRLSHVSVQPVSPLLVGKNLNLKCDIEEIFEGTQRRWLSPQKQ
DPNKDPRVQIGNDGSLTVMKVTGQDHGEWTCVVTYQSRETYFNTPVTVIDLSPAHSQPIY
TSVSSFSRLHLPCSFSFPLPPSWSDSQENGIQGGRWTFTPSPAAGSLTGVVQTLVNLSPG
PPLAWVVNQKRGLDVSALQKKNLNLSLSKKGVTVGDRGNYTCAVEFQRDDTLKRVMRVEV
LQLLTSPVPVAFVGQEVNLTCTLGQPLTSDLEVKWIPPHHSILLPLGSSPHPTLLTIPEA
TYGDGGLWRCELWENKTKLTSVEITLKIERVPVDVWLLVTICAAAVIFVLLLILTVILIR
RHRQGVMMPRRGKRRFCNCKDPTPKGFYRN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgactatagcaagtcgccttattcagcttttgttgcacattgttttcaggagaagctac
aaaatgaagtatgtttctggatacctttcaatcgttattgctttgttcatctcttcaaca
ggggctgaaaatgtggtgtatggtcaggtgggagggacggtcacactccccgtgttgaag
cagggttcagaaagggtgttggtacaatggtactttgggatgaacacacaacctttgata
acccgcaacgcccaaggtcgagagacgatagattcacagtggaaagacaggctgtctctg
tcaaagactgacttctccctgatcatcaacaaaatcagactggaggacttcaaatccttc
aaatgtgaactgaaagatttctggccacaacaaatgacctcagtcaccacattcagactg
tcccatgtgagtgtacagccagtctctcccttgttggttgggaagaatcttaatctgaag
tgtgacatagaggaaatatttgaagggacacagagaagatggcttagtccccagaaacag
gacccgaacaaggacccgcgtgtccagatcggaaatgacggcagcctgacagtaatgaaa
gtcactggtcaagaccatggagagtggacctgtgtggtgacataccagagcagggaaaca
tatttcaacacccctgttactgtaatagacctctcccctgctcactcacagcctatctac
acctctgtctcctccttctctcgtctccatctgccatgttccttttcctttcctctgcct
ccatcctggtcagacagccaggaaaatggcatccagggaggccgctggacctttacccca
agcccagcggcaggctccctcactggggttgtccagaccctcgtcaacctctccccgggg
cctccattagcctgggtggtcaatcagaagagaggtctggatgtctcagccctgcagaag
aaaaatctaaacctctccctgtcaaagaaaggagtaacggtgggggacaggggcaactac
acctgcgctgtggagttccagagggacgacaccctgaagagagtcatgcgtgtggaggtg
ctacagttgttaacctctccagttccagtggcctttgtaggtcaggaggtcaacctcacc
tgtaccctgggccagcctctgacctctgacctggaagtgaaatggatcccaccacatcac
tccatcctcctccctttaggctcctccccccaccccacccttctcaccatccctgaagcg
acgtatggagatggtgggttgtggaggtgtgaattgtgggagaacaaaaccaagctgacg
tcagtggagatcacactgaagatcgagcgagtccccgtggacgtgtggctgttggtcacc
atctgtgctgcagccgtcatcttcgtcctcctcctcatcctcactgtcatcctcatccga
cgccacagacagggggtgatgatgcccagacgtggcaaacgcagattctgcaactgcaaa
gaccccacaccaaaaggattctacagaaactag
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