Salmo trutta (river trout): 115176707
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Entry
115176707 CDS
T08542
Name
(RefSeq) rho guanine nucleotide exchange factor 1-like isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04270
Vascular smooth muscle contraction
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115176707
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
115176707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115176707
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115176707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
PGDH_C
PH
HTH_20
Motif
Other DBs
NCBI-GeneID:
115176707
NCBI-ProteinID:
XP_029592764
Ensembl:
ENSSTUG00000039752
UniProt:
A0A674D5F8
LinkDB
All DBs
Position
37:10861060..10907230
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AA seq
1049 aa
AA seq
DB search
MSIIGAEDEDFENDLDPTVDDHSSHFTSIELVKSRPTHLLVFLQHVILQFDCSSLLCYLH
ADLFKNLSTKETKKQFVEFYNSFLDKGAILRVQIPHNVSFELDRTRPDLLSEEQQRKFVQ
DVQLAQAPEVLRQLEDFRQKRMMGMTPNAAELLEVESHYPTDRIPMEMKEKAVAETLLDK
MSEIHPSIVADEEKCSSIFAAVAFYMKHLGVKSRVADSKKSRGFFRRPLGKNKKSEESTK
SKPKGGFPNILSAAGGWIAGSTEVKLPKVEAEVDKEKVNHERKVSSGPFPSRGSSAPDAA
PPAINRKSVSTGSSPHQGLEVSEGSGVHISVTSSPDFSHSETGLFSSRSDPQLVAEGGEV
SPAGMAGGLAIWEPPSPNEPPLEENLDKDRRKTRRVGRSESARVDRHSSRRRGSSRAKQS
RSRSDVDLQAAATAAHSSPTSPHPFVDEGVLLPEGVLPGLSLSGPTPQQEEQDPRLLELE
QDPPNWREHTPPDTLKDLSKKETKRQEVINELFATEHAHVRMLSVLQTVFWKPLEREELM
TATELATIFPSLDEIIDMHYAFYEHLKKLRQHNFIVKAIGTTLLNRFGGTEGEWFQKLTS
RFCSHQTWALEQLKMRQKKDPRFNSFILEAESRPQCRRLQLKDIIPTEMQRLTKYPLLLE
NIAKCTEDTLEKESIQQSAECCRKILNHVNEEVKQMENLLTLKDYQRRLDTSGLKPSNEL
YLEYKYLDLAQRRMIYEGPLTWRVTKEKTLEVQCVLLGDLLVLLQKQDDKMVLKCQSKSN
IAVQEGKQMLSPIIKLDSAFLREVATDRKAFYVIFTWDSGAQIYELVAQSVGERRNWTDV
IKMAVDELKKTGPPSDLKRGNSILTGGGGNPYSPTTFPQPPLSPTENGGVLLKNSIERDK
DILTDEMKSVDSRHSLIDYLSDKGFDLIGHSNSDQVKVANSALNEVMSLKRLLVGSISLS
DNSQPDAEDGREGPESQDQGLQGEEGGGMKMEEEGGIIAPLVLSQERMEEVRQKLQSLEV
QLKRLQSVEEEHHRLQQALSKFSLEGGNF
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatcggggccgaggatgaggactttgagaatgatctagaccccacggtggat
gaccacagcagtcacttcaccagtatagagctagtgaagagtcggccaacccacctgctg
gtcttccttcagcacgtcatcctgcagttcgactgctcctccctgttgtgttacctccat
gctgacctcttcaagaacctcagtaccaaagagaccaagaagcagtttgtggagttctac
aacagcttcctggacaagggcgctattctcagagtgcaaatccctcacaatgtatcgttt
gagttggaccgtaccagaccagacctgctcagtgaggagcagcagaggaagtttgtccag
gatgtccagttggctcaggccccagaggtgctgcgacagctggaagactttaggcagaag
aggatgatgggtatgacccctaacgcggcagagctgctggaggtggagtctcactacccc
accgatcgtatccccatggagatgaaggagaaggccgtggcagagaccctgctggacaaa
atgtctgagatccatccctccatcgtcgcagacgaggagaaatgttcgtcgatctttgca
gcagtggccttctacatgaagcacctaggagtgaagtccagagtagctgacagtaagaag
tccagagggttcttcaggagaccccttggaaagaataagaagagtgaggagtccactaaa
tctaaaccgaaggggggttttcccaacatcctcagcgccgccggtggctggattgctggc
agcactgaggtcaaacttcctaaagtggaggctgaagtggataaagagaaggtgaatcat
gagcgtaaagtttccagcggccccttcccctctcgaggttcctctgcccctgatgccgcc
cctccagcaataaacaggaagtctgtttccacaggatcctccccccatcagggtttggag
gtcagtgagggctcaggggttcacatcagtgtgacctccagcccagacttctcccacagc
gagacaggtctgttcagcagtcgttcggacccccagttggtagcggaggggggcgaggtg
tcccccgcggggatggcaggggggctggctatatgggagcccccctcacccaatgaaccc
cccctggaggaaaacctggacaaagacagacgcaagacaaggcgtgtggggcgcagtgag
agtgctcgtgtggacagacattcctcccgtcgccgtggctcctcccgggccaaacagtca
cgttcccgtagcgacgtggacctgcaagccgccgccacggcagcacactcctccccgacc
tctccccacccctttgttgatgaaggggtgttactccccgagggtgtcctcccaggtctt
tccctctctggccccaccccccagcaggaggaacaggaccctcgcctcctggagctggag
caggacccgcccaactggagagaacacacccccccagacaccctcaaagacctcagcaag
aaggagaccaagcggcaggaggttatcaacgagttgtttgcgacggagcacgcccacgtg
cgcatgctgagtgttctgcagaccgtgttctggaagcctctggagagagaggaactcatg
accgccacagagctggccaccatcttccccagcctggacgagatcatagacatgcactat
gctttctatgagcacctgaagaagctgcgtcagcacaatttcatcgtcaaggccatcgga
accacgttactcaacaggtttggagggacggagggtgagtggtttcagaagctgacgtct
aggttctgtagtcaccagacgtgggccctggaacagctgaagatgagacagaagaaagac
cctcgtttcaactccttcatactggaggcagagagtaggcctcagtgtcgtaggctgcag
ctgaaggacatcatccccactgagatgcagaggctcaccaaataccccctgctgctggaa
aacatcgccaagtgcacagaggacaccttggagaaggagagtattcagcagagtgcagag
tgctgtaggaagatcctcaaccacgtcaacgaggaggtcaaacagatggagaacctgctg
accctgaaagactaccagcgcaggctggacacctcagggctcaaacccagtaacgagctg
tacctggagtacaagtaccttgacctggcccagagaaggatgatctatgaggggcctctg
acctggagagtgaccaaggagaaaactttagaagtgcagtgtgtgttgctgggggacctg
ttggtgctgttacagaagcaggatgataagatggtgttgaagtgtcagagtaagagtaac
atcgctgttcaggagggcaagcagatgctcagccctatcatcaaactcgactctgccttc
ctccgagaggtggccacagaccgtaaggccttctacgtgatcttcacctgggacagcggg
gctcagatctacgaactggtggctcaatctgtcggggagaggaggaactggacagatgtg
atcaagatggcggtagatgagctgaagaagacaggacctccatctgacctgaagagagga
aacagcatcttaactggaggaggaggaaacccatacagccccaccacgtttcctcaaccc
cctctcagccccacggaaaatggaggagtcttgttgaaaaacagcattgaacgagataag
gacatcctgactgatgagatgaagtctgtggactctcgtcattcgctgattgattacctc
tcggacaaaggcttcgacttgattggccacagcaacagtgatcaggtgaaagtggccaat
agcgcgttaaacgaagtcatgtccctcaagaggctattggttggcagcatcagcctatca
gacaactcacagcctgatgcggaggatggaagggaggggccagagagccaggaccaagga
ctgcaaggggaggagggtggagggatgaagatggaggaggagggagggatcattgctcct
ctagttctgtcccaggagaggatggaggaggtgcgccagaaactgcagagtctggaggta
cagctgaagagactgcagagtgttgaggaggagcaccacaggctgcagcaggccctgtct
aagttctccctggaggggggcaacttctag
DBGET
integrated database retrieval system
