KEGG   Salmo trutta (river trout): 115177064
Entry
115177064         CDS       T08542                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
stru  Salmo trutta (river trout)
Pathway
stru04145  Phagosome
stru04514  Cell adhesion molecules
stru04672  Intestinal immune network for IgA production
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115177064
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115177064
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115177064
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115177064
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115177064
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115177064
  Exosomal proteins of epithelial cells
   115177064
  Exosomal proteins of breast milk
   115177064
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 C2-set_3 Ig_3 Psg1
Other DBs
NCBI-GeneID: 115177064
NCBI-ProteinID: XP_029593399
LinkDB
Position
37:23647912..23651646
AA seq 252 aa
MALCWVYWMAGLSVIQTWATPAGGYQFQGIVDCEYDDTIDNMIYFVKNIFNQKLTTIYDS
RVQKYVGFEEFGIRNADRYNSQAWKMAIRKAEVETICRYSARFFKLSTLERIVPPIVKVR
LTKPSRYGEPSMLECSVLGFYPQEVRVSWLRDGLETTTAVTSTDTLANGDWSYQLHSYLE
FRPRRGESVSCMVEHPSLDEPLEVVWDTSGLDAKLFKMAIGVCSVFIGVAMAIGGGVYYW
WKNRSGFRRVNR
NT seq 759 nt   +upstreamnt  +downstreamnt
atggctctctgctgggtctattggatggctggactttctgtcattcagacctgggcaaca
ccagcaggtgggtaccagttccaggggatagttgactgtgaatatgatgacaccattgac
aatatgatctactttgtgaaaaacatattcaaccaaaaattgaccaccatctatgactcc
agggttcagaagtatgtgggttttgaggagtttggcatacgcaatgcagatcgctacaac
agccaagcttggaaaatggctataaggaaagcagaagtggagactatttgccgatacagt
gcaagattcttcaaactgagcactttggaaagaatagtgcctcccattgtcaaagtccgc
ctgaccaagccctctcgctacggggagccgtccatgctggagtgcagcgttctaggcttc
taccctcaggaggtgagggtgagctggctgagagacgggctggagaccaccacagccgtg
acctccactgacacactggctaacggggactggagctaccagctccactcctacctagag
ttcaggcctcggagaggggagagtgtaagctgcatggttgagcaccccagcctagatgaa
ccactggaggtggtctgggatacctcaggcctggatgctaaattgtttaaaatggcaata
ggggtgtgttccgttttcattggtgtagccatggctattggaggaggagtttactactgg
tggaagaacaggtcaggctttaggcgtgtgaatagataa

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