Salmo trutta (river trout): 115177064
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Entry
115177064 CDS
T08542
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
stru04514
Cell adhesion molecules
stru04672
Intestinal immune network for IgA production
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115177064
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115177064
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115177064
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115177064
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115177064
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115177064
Exosomal proteins of epithelial cells
115177064
Exosomal proteins of breast milk
115177064
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
C2-set_3
Ig_3
Psg1
Motif
Other DBs
NCBI-GeneID:
115177064
NCBI-ProteinID:
XP_029593399
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All DBs
Position
37:23647912..23651646
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AA seq
252 aa
AA seq
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MALCWVYWMAGLSVIQTWATPAGGYQFQGIVDCEYDDTIDNMIYFVKNIFNQKLTTIYDS
RVQKYVGFEEFGIRNADRYNSQAWKMAIRKAEVETICRYSARFFKLSTLERIVPPIVKVR
LTKPSRYGEPSMLECSVLGFYPQEVRVSWLRDGLETTTAVTSTDTLANGDWSYQLHSYLE
FRPRRGESVSCMVEHPSLDEPLEVVWDTSGLDAKLFKMAIGVCSVFIGVAMAIGGGVYYW
WKNRSGFRRVNR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggctctctgctgggtctattggatggctggactttctgtcattcagacctgggcaaca
ccagcaggtgggtaccagttccaggggatagttgactgtgaatatgatgacaccattgac
aatatgatctactttgtgaaaaacatattcaaccaaaaattgaccaccatctatgactcc
agggttcagaagtatgtgggttttgaggagtttggcatacgcaatgcagatcgctacaac
agccaagcttggaaaatggctataaggaaagcagaagtggagactatttgccgatacagt
gcaagattcttcaaactgagcactttggaaagaatagtgcctcccattgtcaaagtccgc
ctgaccaagccctctcgctacggggagccgtccatgctggagtgcagcgttctaggcttc
taccctcaggaggtgagggtgagctggctgagagacgggctggagaccaccacagccgtg
acctccactgacacactggctaacggggactggagctaccagctccactcctacctagag
ttcaggcctcggagaggggagagtgtaagctgcatggttgagcaccccagcctagatgaa
ccactggaggtggtctgggatacctcaggcctggatgctaaattgtttaaaatggcaata
ggggtgtgttccgttttcattggtgtagccatggctattggaggaggagtttactactgg
tggaagaacaggtcaggctttaggcgtgtgaatagataa
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