Salmo trutta (river trout): 115177484
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Entry
115177484 CDS
T08542
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
stru04514
Cell adhesion molecules
stru04672
Intestinal immune network for IgA production
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115177484
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115177484
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115177484
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115177484
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115177484
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115177484
Exosomal proteins of epithelial cells
115177484
Exosomal proteins of breast milk
115177484
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
Ig_3
C2-set_3
MHC_II_beta
Motif
Other DBs
NCBI-GeneID:
115177484
NCBI-ProteinID:
XP_029594155
Ensembl:
ENSSTUG00000035476
LinkDB
All DBs
Position
37:complement(6809351..6814933)
Genome browser
AA seq
266 aa
AA seq
DB search
MSVLNLSSIHLLLLFSSLSGVDGYFGHFEMRCRFSSEDPQDIEYLLQVYGNKKLLGQYNS
TTEKCTVYTQWMKNFTETACKGPAFLAERREEMKKYCSSNVPVVYGYLLDKAVEPYIRLR
PVEPFSTRHPAMLVCSAYDFYPKPIRVTWLRDGQEVTSNVTSTEELVNGDWTYQIHSHLE
YTPTPGERITCMVEHFSLTEPKLYDWDPSLPGPERNKMVIGACGLLLGVVFIAAGLIYYR
KKSTGEETPAILCQNNQILFKSKFEM
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgctgaatctctcgtccatccacctactgcttctcttctcctctctgtctgga
gtagatggctattttggacactttgagatgaggtgtcggttcagctccgaggatccccaa
gatattgagtatctgctgcaggtctacggcaacaagaagttactgggacaatacaacagc
acaacagagaaatgtacggtctacacacaatggatgaagaacttcactgaaacggcctgc
aaaggccctgcttttctggccgaaaggagagaagaaatgaagaaatactgcagcagcaac
gttcctgtggtgtatgggtacttactagataaggcagttgagccctacatcaggctgagg
ccagtggagccgttcagtactagacacccggccatgctcgtgtgcagtgcctacgacttc
taccccaaacccatcagagtgacgtggctgagggacggacaggaagtgacctcaaatgtg
acttccacagaggagctggtcaatggggactggacctaccagatccactcgcacctggag
tacacacccacacctggagagagaatcacctgtatggtggagcacttcagcctcactgag
cccaaactgtatgactgggacccctccctgcctgggcctgagaggaataagatggtgatc
ggggcctgtgggctgctgctgggggtggtctttatagcagctggactgatctactacagg
aagaaatctactggtgaggagacaccggctattctatgtcaaaataaccaaatacttttc
aagtccaaatttgaaatgtaa
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