KEGG   Salmo trutta (river trout): 115177484
Entry
115177484         CDS       T08542                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
stru  Salmo trutta (river trout)
Pathway
stru04145  Phagosome
stru04514  Cell adhesion molecules
stru04672  Intestinal immune network for IgA production
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115177484
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115177484
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115177484
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115177484
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115177484
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115177484
  Exosomal proteins of epithelial cells
   115177484
  Exosomal proteins of breast milk
   115177484
SSDB
Motif
Pfam: C1-set C2-set_2 Ig_3 C2-set_3 MHC_II_beta
Other DBs
NCBI-GeneID: 115177484
NCBI-ProteinID: XP_029594155
Ensembl: ENSSTUG00000035476
LinkDB
Position
37:complement(6809351..6814933)
AA seq 266 aa
MSVLNLSSIHLLLLFSSLSGVDGYFGHFEMRCRFSSEDPQDIEYLLQVYGNKKLLGQYNS
TTEKCTVYTQWMKNFTETACKGPAFLAERREEMKKYCSSNVPVVYGYLLDKAVEPYIRLR
PVEPFSTRHPAMLVCSAYDFYPKPIRVTWLRDGQEVTSNVTSTEELVNGDWTYQIHSHLE
YTPTPGERITCMVEHFSLTEPKLYDWDPSLPGPERNKMVIGACGLLLGVVFIAAGLIYYR
KKSTGEETPAILCQNNQILFKSKFEM
NT seq 801 nt   +upstreamnt  +downstreamnt
atgtctgtgctgaatctctcgtccatccacctactgcttctcttctcctctctgtctgga
gtagatggctattttggacactttgagatgaggtgtcggttcagctccgaggatccccaa
gatattgagtatctgctgcaggtctacggcaacaagaagttactgggacaatacaacagc
acaacagagaaatgtacggtctacacacaatggatgaagaacttcactgaaacggcctgc
aaaggccctgcttttctggccgaaaggagagaagaaatgaagaaatactgcagcagcaac
gttcctgtggtgtatgggtacttactagataaggcagttgagccctacatcaggctgagg
ccagtggagccgttcagtactagacacccggccatgctcgtgtgcagtgcctacgacttc
taccccaaacccatcagagtgacgtggctgagggacggacaggaagtgacctcaaatgtg
acttccacagaggagctggtcaatggggactggacctaccagatccactcgcacctggag
tacacacccacacctggagagagaatcacctgtatggtggagcacttcagcctcactgag
cccaaactgtatgactgggacccctccctgcctgggcctgagaggaataagatggtgatc
ggggcctgtgggctgctgctgggggtggtctttatagcagctggactgatctactacagg
aagaaatctactggtgaggagacaccggctattctatgtcaaaataaccaaatacttttc
aagtccaaatttgaaatgtaa

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