Salmo trutta (river trout): 115177846
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Entry
115177846 CDS
T08542
Name
(RefSeq) stromal cell-derived factor 1-like
KO
K10031
C-X-C motif chemokine 12
Organism
stru
Salmo trutta (river trout)
Pathway
stru04060
Cytokine-cytokine receptor interaction
stru04672
Intestinal immune network for IgA production
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115177846
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115177846
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115177846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
stru04052
]
115177846
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115177846
Cytokines and neuropeptides [BR:
stru04052
]
Cytokines
Chemokines
115177846
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Chemokines
115177846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
115177846
NCBI-ProteinID:
XP_029594698
Ensembl:
ENSSTUG00000034331
UniProt:
A0A674C246
LinkDB
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Position
38:complement(4488008..4500217)
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AA seq
98 aa
AA seq
DB search
MDVKVLAVLVLLAVAMDVPPSTAKPISLVERCWCRSTLNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQTYLKNAINKVKKSRRRA
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaagtactggctgtgttggtcctactggctgtggccatggatgtacctccc
tctacggctaagcccatcagcctggtagagaggtgttggtgtcgctccactctcaacacc
gtccctcagaggagcatcagagagctcaagttccttcacacacccaactgccctttccaa
gtcattgccaagctgaagaacaacagagaggtgtgcattaaccccgagaccaaatggctg
cagacgtacctgaagaatgccattaacaaggtgaagaagtccagaagacgtgcttag
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