Salmo trutta (river trout): 115177900
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Entry
115177900 CDS
T08542
Name
(RefSeq) slit homolog 1 protein-like
KO
K06838
slit 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115177900
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Axon guidance molecules
115177900
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRRNT
LRR_9
LRRCT
LRR_14
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
115177900
NCBI-ProteinID:
XP_029594755
Ensembl:
ENSSTUG00000023316
LinkDB
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Position
38:1168824..1304022
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AA seq
934 aa
AA seq
DB search
MPRRTIAGAGSGGCGARLDHVGVAWAGLWLLLWGCLLGAGGVEACPSLCTCVGATVDCHS
LGVRNIPKNIPRTTERLDLNGNNLTTISKTDFSGLKHLRVLHLMENQISNIERGAFDDLK
ELERLRLNRNRLTQLPELLFQKNEALSRLDLSENAIQAIPRRAFRGATDIRNLQLDKNHI
TCIEEGAFRALRTLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNSLRCDCHLSWLSPW
LRQRPTLGLYTQCSSPPTLRGLNLAELQKNEFTCSGQSDSAFVQPCSLASGSCPPMCSCS
NNIVDCRGKGLTAIPAHLPEAMTEIRLEQNGIKSVPPGAFTSYKKLRRIDLSNNQISEIA
PDVFQGLRALNSLVLYGNKITDLPRGLFEGLSSLELLLLNANKIHCIRATAFQDLENLAL
LSLYDNKIQTLAKGTFSPLHSIQTLHLAQNPFVCDCNLKWLADYLRSNPIETSGARCASP
RRLANKRIGQIKSKKFRCSAKEQYHIPGTEDTRLNNECNSKPVCPAKCRCEANVVDCSNL
RLTKFPQHLPASTTELRLNNNDISVLEATGVFKTLSQLKKINLSNNKISEIEDGVFEGAG
SVVELHLTANHLDSVRGTMFRGMGGLRMLMLRNNRISCIHNGSFTGLTSVRLLSLYDNQL
HTIMPGAFDTLPNLSTLNLLANPFNCDCRLAWLGAWLRSRRIVTGNPRCQSPSFLREIPL
QDVAAPDFRCDDSAVLEESSCVARPQCPSECTCTETVVRCSNKHLQAMPKGLPRNVTELY
LDGNQFSMVPRELSTFKHLQLVDLSNNRISSLSDSSFSNMSQLTTLILSYNSLRCIPPLA
LAGLRSLRLLSLHGNDISGLLEGIFSDVASLSHLAIGANPLYCDCHLRWLSDWVKSGYKE
PGIARCAGPMGMEGKLLLTTPETKFECLVCQLCL
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggagaaccattgctggagccgggtcagggggctgtggagccaggctggaccac
gttggggtggcctgggctgggctgtggctgctgctgtggggttgcctgctgggggctggc
ggggtggaggcatgcccttctctgtgtacctgtgtgggagccacggtggactgccacagc
ctgggggtccggaacatccccaagaatatccccaggaccacagagagacttgatctaaat
gggaacaacctgacaaccatcagcaagacagacttctctggcctcaaacacctcagagtt
cttcacctgatggagaaccagattagcaacattgagagaggagcatttgatgatctgaag
gaactggagagacttcgtctgaacaggaaccgtctcactcagcttcctgaactcctgttc
cagaagaatgaggctctgtctcgactggaccttagcgagaatgctatccaagccattccc
aggagagctttcagaggggccacggacatcaggaaccttcaactggataagaaccacatc
acttgcatcgaggagggggccttccgtgctctgagaactctggaggttctcacattgaac
aacaacaacataagcagcattccagtctccagcttcaaccacatgcccaaactacgcacc
tttcgtctccactctaacagtctgaggtgtgactgtcacctgtcctggttgtctccctgg
ctgagacagaggcccaccctgggtctgtacacacagtgcagctcccctccaaccctcagg
ggactcaacctggctgaactgcagaagaatgagttcacctgctcaggtcagagtgacagt
gcgtttgtccagccgtgtagcctggcgtctggctcctgtcctcccatgtgttcctgtagt
aacaacatcgtagactgtagaggcaagggcctcactgccatacctgctcacctgcctgaa
gccatgaccgagattcgtctggagcagaatggtatcaagtcagttcctcctggggccttc
acctcctacaagaagctgcgcagaatagatctgagtaacaaccaaatatcagagattgct
cccgatgttttccaaggcctgagagccctcaactcactggtcctgtatggtaataagatc
acagatctccccagaggactgtttgagggactcagctctctagaactgcttctcctgaat
gccaataagatccactgtattcgagccacagccttccaggacctagagaatctagctctg
ctgtctctctacgacaacaagatccagaccctggctaaaggaaccttctcacccctacac
agtatacagacacttcacctggcccagaacccgtttgtgtgtgactgtaacctgaaatgg
ctggcagactacctgaggtccaaccccatagagaccagcggtgcccgctgtgccagccca
cgcagactggccaacaaacgcatcgggcagatcaagagcaagaagttccgttgctctgct
aaggagcagtaccacatcccaggtacagaagacacccgtctgaataatgagtgtaacagt
aagccagtgtgtcctgctaagtgtcgctgtgaagctaacgtagtggactgctctaacctc
cgtctcaccaagttcccccaacacctacctgcctctaccaccgagctgcgtctcaacaac
aatgacatctcagtgctggaagccaccggggtcttcaagaccctctctcagctcaagaaa
attaaccttagcaacaacaagatctcagagatcgaggacggagtgtttgagggggcgggg
tctgtcgtggagctccacctgacagccaatcacctggactctgtcagagggaccatgttc
aggggcatgggtggcctccgcatgctgatgttgaggaacaaccgtatcagctgtatccat
aacggcagcttcactggtctgaccagcgtccgtctgttgtctctctatgacaaccagctc
cacaccataatgcctggggccttcgacacactgcccaacctctctacactgaacctgctg
gccaacccgtttaactgtgactgtcgtctggcgtggttgggggcatggcttcgttctaga
cgaatcgtaacagggaaccctcgctgccagagcccctccttcctcagagagatcccacta
caggacgtagcagcaccagacttccgctgcgacgacagtgcagtattggaggagagtagc
tgtgtagctcgtcctcagtgtcccagtgagtgtacctgtacagagacggtggtccgctgt
agtaacaaacacctccaggccatgcccaaggggttgccccgcaacgtcactgaactgtat
ctggatgggaaccagttcagcatggtgcccagagaactgtccaccttcaaacacctgcag
ctggtagatctgagtaacaacagaatcagctccctgtctgactcctccttctccaatatg
agccagctcaccaccctcatcctgagttacaactctctacgctgcatccctcctctggcc
ctggctggactacgctctctcagactactatctcttcatggtaacgacatctctggacta
ctggaggggatctttagtgatgtggcctccctgtctcacctggcaatcggtgccaacccc
ctgtactgtgactgtcatctgcgctggctgtctgactgggtgaagagtgggtacaaggag
cctggcatcgcccgctgtgccggaccaatgggcatggagggaaaactgctgctcaccaca
cctgagaccaagtttgaatgtctggtgtgccagctgtgtctctga
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