Salmo trutta (river trout): 115178274
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Entry
115178274 CDS
T08542
Name
(RefSeq) TNF receptor-associated factor 5-like isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04217
Necroptosis
stru04621
NOD-like receptor signaling pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115178274
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115178274
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115178274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115178274
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
115178274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-TRAF_2
TRAF3_RING
zf-C3HC4_2
zf-C3HC4
EzrA
ATG16
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
zf-U11-48K
Spt20_SEP
NPV_P10
DUF948
DUF1151
CorA
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
115178274
NCBI-ProteinID:
XP_029595238
Ensembl:
ENSSTUG00000020552
LinkDB
All DBs
Position
38:20519777..20531964
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AA seq
599 aa
AA seq
DB search
MNVEVNYKSISRTSSHIPFLKTRLQVGMATKESDPSGSGGLSRQNSGVAGPWESDLTAVQ
HSLKFVKKLEEHYVCPTCKGVVLNPHQTGCGHIFCYRCIQGLLENSPATTPACPLDRGLI
KSDEVFQDNCCKREISNLDVYCTNSPNCSHRMTLCRLQEHLQTCQFESLQCSNAGCSEVM
QRKDLQEHLRISCSYRMEPCHYCKHPYTCCQLEDHERHSCPEVEIKCPNKCSQMIKRCML
EDHADQCPEVQTDCVFKKYGCFVRERRAQVQVHEETALNDHILLVLGSNTKLETQMAILQ
QEVLLRHKELQERSRQVSGLEKEVRPLAQQVSRCDNTLSAVQRSLEEQRDHISSVQLQLV
ELSSVFGPGVAREELGQIRASLDALRQQVSVTEGLKDHLGELKETYMRHSRLLSIHTAQL
ECNEEHFRELESTSYDGKLIWKLRDYRKRKEAGSQGQGPCLSSAPFHTGRSGYKMAARAY
LNGDGAGRDTHLSLYVVLMRGDFDPLLPWPFRQPVSLSVLDQSGTNNHLTMSFKPDPENT
SFHRPGSAAATSNAPTNVASGFQCFASHAQLETPKNAIYVRDDTLFVKVKVDTSGLEDL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggaggtaaattacaaaagtatatcaagaacatcgtcgcacattccgttttta
aagacacgtctacaggttggcatggcaacaaaggagagtgacccgagtggatccggagga
ctctccaggcagaattcgggagtggcgggaccgtgggaatcggacttgactgcagtgcag
cacagtttgaagtttgtgaagaagctggaagagcactatgtttgtcccacctgtaaagga
gtagttctcaacccacaccaaaccggctgcggacacatcttctgctaccgctgcatccaa
gggctcctggaaaactcccctgccaccacccctgcctgtcctttggacagaggtttgatc
aaatctgatgaggttttccaagacaattgctgcaaaagggagatctcaaatttagacgtt
tactgcacaaactcccccaactgctcccacagaatgacattatgtcggttgcaggagcat
ctacagacatgtcagtttgagtcattgcagtgttccaacgcaggctgcagtgaggtcatg
caacgtaaggacctgcaggagcacctcagaatcagctgctcctatcgtatggagccctgt
cactactgcaagcatccttacacatgctgccaactcgaggatcatgagaggcattcatgc
ccagaggttgaaatcaagtgccccaacaaatgctcccagatgattaaaagatgcatgctt
gaagaccatgctgaccagtgtcctgaggtgcagacggactgtgtttttaagaaatatggc
tgctttgtccgggagaggagagcccaagttcaagttcatgaggaaaccgctctcaatgac
catatcctcctggttctggggagcaacaccaagctggagacacagatggcaatcctccag
caggaggtgctgctgaggcacaaggagctccaggagaggagccgccaggtcagcggtctg
gagaaggaggtccgcccgctggcccagcaggtcagccgatgtgacaacaccctgtctgca
gtacagaggtctctggaggagcagagggaccacatctcaagcgtccagctccagctcgtg
gagctgtccagtgtgtttggccctggtgtggcccgggaggaactgggccaaatcagagcg
tccctggacgccctcagacagcaggtgtccgtcacggaggggctcaaagaccacctgggt
gagttgaaggagacctacatgcgccactcgcgcctcctcagcatccatacagcacagctg
gagtgcaacgaggagcacttcagagagctcgagtccacctcgtacgatggcaagctcatc
tggaagctccgcgactaccgcaagaggaaggaggccgggtctcaaggccagggaccgtgc
ctgagcagcgcgcccttccacacgggccgcagtggctacaaaatggccgccagggcctac
ctgaacggcgacggggccggccgggacacccacctgtctctctacgtggtcctcatgagg
ggtgactttgaccccctcttgccctggcccttcagacagcctgtgtcattgtcagtgctg
gaccagagcggcaccaacaaccacctgactatgagtttcaaacccgacccagaaaacact
agcttccaccggcctggctcggccgctgcaacctccaacgcccccaccaacgtggcctct
ggtttccagtgctttgcctcgcatgcccagctggagacacccaagaacgccatatacgtg
agagacgatacgctctttgttaaggtcaaagtagacacgagcggtttggaggacttgtag
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