Salmo trutta (river trout): 115180292
Help
Entry
115180292 CDS
T08542
Name
(RefSeq) apoptotic protease-activating factor 1-like isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
stru
Salmo trutta (river trout)
Pathway
stru04115
p53 signaling pathway
stru04210
Apoptosis
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115180292
04115 p53 signaling pathway
115180292
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115180292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
APAF1_C
NB-ARC
APAF-1-like_WHD
ANAPC4_WD40
CARD
NBCH_WD40
RMC1_N
eIF2A
Ge1_WD40
WD40_like
Nup160
CARD_2
AAA_16
NACHT
nSTAND1
AAA_22
Motif
Other DBs
NCBI-GeneID:
115180292
NCBI-ProteinID:
XP_029598124
Ensembl:
ENSSTUG00000038551
LinkDB
All DBs
Position
40:7124165..7201462
Genome browser
AA seq
1265 aa
AA seq
DB search
MAMMEEGARSCLLQSRSSLEQDIRASYLMDHMISDGVLTGDEEDRIRSKPTRKEQAAALL
ELLLRKDNQAYISFYNALVRESYGDLASLLHNSLPLVSPEAEKSFSDGGTRYVQAVLSEG
GVPQRPVVFVSRPALVNRVREKLYRLQEPGWVTVFGMAGSGKSVLAAEAARDHALITECF
PGGVHWLSIGQLDRSDLLVRIQSLCFRLEQQSQEKDPSSSLHRPPGSLEEAKERLRFLML
RRYPRSLLILDDIWDSSVIKAFDIQCRVLFTTRDRSLADCVSGSKSEVAVESGLEEDQAL
EILALYVNGKPQRLPEQARSIVRECKGSPLVVSLIGALLREFPDRWAYYLHTLQQKKFKR
IRKSSSYDYDALDQAMAASIQVLSEEHRELYIDLTVLEKDVKVPAKVLSVLWDLEPEEVE
DVLQDFVNKSLLFRDCHHRPYLYYLHDLQLDFLAEMNRSGLESLHTKVVRQYQQRYSQGP
PTSGDEECLYWFRFLTYHMAKANLTQELCSLMFSLDWVRTKAQIMGPAHLINDYVEYGAI
LDKENSEVRGHFQEFLSLNGHQLEQRPFPDVVQLALSQPDSSEVYRQALLQAQERATRGG
LYLDWMNKSSLKSLSRLVVQPHQGSIYAACFSHDGTKIASCGSSKTLRVFKSTSGEKMLE
IQAHDDEVLCCAFSPDDRLLATCSSDRKVKVWNVERGTLMRMFEEEHEEQVNHCQFTNTR
RRLLLATCSNDKFLNTKLWNINKPSSQNTMFGHLEPVNHCCFSPDDAYLSTSSSDGTLKL
WEVSSANEWKSIDVADMFPEQREQTAVMVKCSTWSADGRTIICAARNAVFVFDVETAAML
LEIRTSRLSTVQYCHACPSSNLVAIALSHYAVELWDIETSKKMADCSGHLSWVHGVQFSP
DGSLLLSCSDDQTVRVWETNRVHTSSAVCLKRDSDVLFNNGDITVVAADNRNRLQVRNGR
TGAVMFQSEDQKSRIRCTAICSQTSAVGLGREDGTIQVLEVPSGTSLATLQGHTRTVLHC
QFTPEGHTLITSSEDTTMRVWRWRTGECVVLEGHKEQVRCFSLLTTSPSSETHLLSWSFD
GTIKVWDMSSGERLQDLVCHQGAVLACDVSPDGQLFATTSADKTAKVWSSASWECVRLLN
GHQDCVRSCRFSWDGRRLATGDDNGEIRLWNVKDGTLLKICSRDNKDAMDSLHGGWVTDL
HFSPDNTVLLSTGGYIKWWNVEKGEALQTFYPTGANLKRIHVSPDFSTFVTIDNIGILYV
LKKVE
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatggaggaaggggcgcggagctgcctgcttcagtcacgctccagcctggag
caggacatcagggcttcctacctgatggatcacatgatcagtgacggcgtgctgacgggg
gacgaggaggacaggatcaggagcaagcccaccaggaaagagcaggcggcggccctgctg
gagctgctcctgaggaaggataaccaggcctacatctccttctacaatgccctggtccgt
gagagctacggagacctggccagcctgctccacaacagcctgcccctggtctcccctgag
gctgagaagagcttctcagacgggggcacccgctatgtccaggcggtgctgagtgagggc
ggcgtgccccagagacctgtggtgtttgtgagccggccagccctggtgaaccgggtcagg
gagaagctctaccgcttgcaggagcccggctgggtcactgtgttcggcatggccggctcc
ggcaagtcagtcttggctgcggaggcagcccgagaccacgcactcatcacagagtgtttt
ccaggaggagtccactggctgtccataggccagctggaccggtctgacctgctggttagg
atccagtcactgtgtttccgcctggagcagcagagccaggagaaagacccctcgtcctcc
ctccaccggcctcctggctctctggaggaggccaaggagcgactacgcttcctcatgctc
cgtcgttaccccaggtcgttgctgatactggatgacatctgggacagctctgtgatcaag
gcctttgacatccagtgtcgagtactgttcaccacccgagacagaagcctagccgactgt
gtcagcggttctaagtctgaggtggcagtggagagtggtctggaggaagatcaggccttg
gagatcctcgccctgtatgtcaacgggaaaccccagagactcccagaacaggcccgcagc
attgtccgagagtgcaaaggctcccccttggtggtgtccctaatcggggccctgctgcgg
gagttcccggaccgctgggcctactacctgcacacgctccagcagaagaagttcaagcgt
atccgtaagtcgtcttcgtatgactacgatgcccttgaccaggccatggctgccagcatc
caggtcctgtctgaggaacacagggagctgtacattgacctcaccgtgctggagaaggac
gtcaaagtacctgccaaggttctgtcggttctgtgggatctagaaccggaggaggtggag
gacgttctccaggactttgtgaacaagtccctactgttccgtgactgtcaccaccggccc
tacctctactacctccacgacctccagctggacttcctggctgagatgaaccgctctggt
ctagaaagcctccacaccaaggtggtgcgtcagtaccagcagcgctacagccagggtccc
cccacctcaggagatgaagagtgcctctactggttcagattcctcacctaccacatggcc
aaggccaacctcacacaggagttgtgctctctgatgttctctctggactgggtcagaact
aaggctcagattatgggaccggctcatctcatcaatgactatgtggagtacggcgccata
ctggacaaagagaacagcgaggtgcggggccacttccaggagttcctgtctctgaacggc
caccagttggagcagcgtccgttccctgacgtagtgcagctggccctgtcccagccagac
tcctctgaggtgtaccgccaggccctgctgcaggcgcaggagagggccaccagaggggga
ctctaccttgactggatgaacaaaagtagtctgaagagcctgtctcgtctggtggtccag
ccccaccaggggtccatctacgctgcctgcttctcccacgacggcaccaagatcgcctcc
tgtggctccagcaagacactgcgagtgtttaagagcacctctggggagaagatgctggag
atccaagcccacgacgatgaggtgctctgctgcgccttctctccagatgaccgtctccta
gcaacctgctccagtgataggaaggtcaaggtttggaacgtggagcgtgggactctgatg
aggatgtttgaggaggaacacgaggagcaggtcaaccactgtcagttcaccaacacacgt
cgacgcctcctactggccacctgttccaacgacaagttcttgaacaccaagctgtggaac
atcaataaaccctcctcccagaacaccatgtttggtcatttggagcctgtcaatcactgc
tgtttctcccctgatgatgcctacctctccacctcttccagcgacggaaccctgaagctg
tgggaggtgtcctcagccaatgagtggaagtccatagatgtggcggacatgttcccggag
cagagagagcagactgcagtcatggtgaagtgcagcacctggtcagcagacggcaggacc
atcatctgtgctgccaggaacgcagtctttgtgtttgatgtagagacggcagccatgttg
ttggagattcggaccagtcgtctgagcacggtgcagtactgtcacgcctgtcccagcagc
aacctggtggccatcgcactgtcacactatgctgtggagctgtgggacatagagaccagt
aagaagatggctgactgtagtggtcatctgagctgggtccatggagtccagttctcccct
gacggatctctactgctctcctgttctgacgaccagaccgtcagggtgtgggagaccaat
agagtccacacctcctcggctgtctgtctgaagagggactctgacgtgctctttaacaat
ggtgacattaccgtggtcgccgccgacaaccgcaacagactgcaggtgaggaatgggagg
accggagcggtgatgttccagtcagaggaccagaagtctcgtatacgctgcactgctatc
tgctcacagacctcagccgtggggctgggacgagaggatgggacgatacaggtgttggag
gtgccgtcggggacctctctagccactcttcagggtcacaccaggacagttctccactgc
cagttcaccccggagggacacacactcatcacctcctctgaggacaccaccatgcgggtg
tggaggtggaggacaggtgagtgtgtggttctggagggccacaaggagcaggtcagatgc
ttctctctgctcaccacctcaccctcctcagagacacatctcctcagctggtcctttgac
ggcacaatcaaggtgtgggacatgtctagtggtgaacggctgcaggacctagtgtgtcac
cagggggcggtgctagcctgtgatgtgtcacctgacggacagctcttcgccaccacctcc
gctgacaagactgccaaggtgtggagcagtgcatcgtgggagtgcgtgcgcctgttgaac
ggccaccaggactgtgtccgcagctgccgcttctcttgggacggccggcgcctagcaacc
ggcgacgacaacggagagatacggctgtggaacgtgaaggatggtactctgctaaagatc
tgttcccgtgacaacaaggacgccatggactctctgcacggaggctgggtgaccgacctg
cacttctccccagacaacactgtgctgctgtctacaggaggatacattaagtggtggaac
gtggagaaaggggaggccctccagaccttctacccaacaggagccaatctgaaaaggatc
catgtgtcacctgacttctccaccttcgtcaccatcgacaatatcggaatcctctacgtc
ctgaagaaggtggaatga
DBGET
integrated database retrieval system
