Salmo trutta (river trout): 115180504
Help
Entry
115180504 CDS
T08542
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115180504
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115180504
04261 Adrenergic signaling in cardiomyocytes
115180504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115180504
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115180504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_2
MCP-like_PDC_1
DUF2201
Motif
Other DBs
NCBI-GeneID:
115180504
NCBI-ProteinID:
XP_029598506
Ensembl:
ENSSTUG00000033393
LinkDB
All DBs
Position
40:5361751..5546327
Genome browser
AA seq
1092 aa
AA seq
DB search
MDTYSSFTALLLLLASLNSVSTVQFPSPLLIKEWVEQMQQELVTLTDTASGVENLIQIFQ
SHRKYFSVGSNDASQLVANAAGNIENLLANRSRALKALASAAEDFQMWHRWKNDPEPDDI
HYYYAKENLDSNDTEVKKPNRLYPEFKEDEQFRRLISYNTTAVHIPTDIYEGSTIVLNEL
NWTDALEAVFRKNKEEDPTLLWQVFGSATGLARYFPASPWMDSRKTPNKIDLYDVRRRPW
YIQGAASPKDMLILVDASGSVSGLTLKLIHTSVNEMLETLSDDDYVNVVYFNDKAVKAGC
FQNLVQANVRNKRFLKDAVRNISAKGITNYKGGFELAFEQLSSLNVTQGRALCNKIIMLF
TDGGEERAQEIFQKYNADKKVRIFTFSVGQHNYDKGPIQWMACTNKGYYYEIPSIGAIRI
NTQEYLDVLGRPMVKANKKAKQVQWTNVYQDALELGLVITGTLPVFNKTNTKADKERGLQ
RPQNQLILGVMAIDVSLDDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLCPKNPKFQEP
VTLDFLDAELEDEIKVEIRTNMINGETGHRTVHTLVKSQDERYIDRSERSYTYAPVKGTD
YSLALVLPVYSLHYIHTTIGDTITQAKLELGDEVSESLQEDKFEEYGYTLIAPREYCKDL
KPSKNNTEFLMDFNEYIDRKTPNNPLCNVDLVNRLLLDAGITSDLVKQWRDQMPNGVLAR
FVATDGGITRIYPKSAGLDWTEDPETYESSLYKRSLDNDIYIFTPTPYQEDTNMTEDSVL
VSRAVNLDIDGVRLKPAVVGVKLDISTWMTNFINATLKMNCKDEICGCQRNDEHVDCVIL
DDGGFLVMANRDEYIGQIGQFFGMIDPILMVNLVNMSLFTLNKTYDYQSVCDPKRESKGS
AAGLRSVYVPTIADILNVGWLASAAAWSILQQLLVSIAFPNFLHAADTDDVIPDMSKESC
ITEQTQYFYDNEEKSFRGTLDCENCSRMFHAEKLWKTNLVFVIADAKLTCMSCDHKPLIQ
AEQPSEGPDPCEMAEKPRFRKGPDACFDNNEREEDFDCGGASALSPSLLAMVALQLALLW
LLAGSTHHAVPS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggatacctacagctccttcaccgctctacttttacttctggcttccttaaatagtgtg
tcaaccgtgcagttcccgtcgccacttctgataaaggaatgggtggagcagatgcagcag
gagttggtcacactgacggacacagccagcggagtggagaacctcatacagatcttccag
agccacaggaagtacttcagtgtggggtccaacgatgccagccagctggtggctaatgca
gctgggaacatcgagaatctcctggccaaccgttctcgtgctctcaaggcgttggcatcc
gctgcagaggattttcagatgtggcatcggtggaagaatgatcctgagcctgatgacatc
cattactactatgccaaagaaaacctggactcaaatgatacagaggtcaagaagccaaac
cggctttatccagaatttaaggaagacgagcaatttagacgcctcatctcctacaacacc
acggcagtccacatacccacggacatatacgagggctccaccattgtgctgaatgagctg
aactggacagacgcattagaggccgtgtttaggaagaacaaggaagaggatcctactcta
ctgtggcaggtgttcggcagtgccaccggattggctcgctacttcccagcatccccttgg
atggactcgcgaaaaacacccaataagatcgacctctacgacgtccggcggcgaccgtgg
tacatccagggggcagcgtctcctaaggacatgctgatcctagtggatgcgagcggcagt
gtctctggcctcaccctgaagctcatccacacctctgtcaacgagatgctggagaccctg
tctgacgatgactacgtcaatgtggtctatttcaatgataaagcggtgaaggcggggtgc
tttcagaacctggtccaggccaacgtgaggaacaagagattcctgaaggatgctgtgcgg
aacatctcagccaagggcatcaccaactacaaaggcggcttcgagttggccttcgagcag
ctctcatcgttgaacgtgacccagggcagggcgttgtgtaacaagatcatcatgctgttc
actgacggaggagaggagagggcccaggagatcttccagaagtacaacgctgacaaaaag
gtgcggatattcacgttctcagtgggccaacacaactatgacaaaggaccaatccagtgg
atggcctgcaccaacaaagggtactattatgaaatcccctccatcggtgctatcaggatc
aacactcaggagtacctggatgtactgggaaggcccatggtcaaagcaaacaagaaggcc
aagcaggttcaatggaccaacgtttaccaggacgcactggagctgggtctggtgatcaca
ggaacacttccagtcttcaacaagaccaacaccaaagctgacaaagagaggggactacag
aggccccaaaaccagctgatcctgggagtgatggctatcgatgtgtctctggacgacatc
aaaagactaacgccgagatttacatttggaccaaatggctattactttgccattgacccc
aacggttatgtcttgctgcatcccaacctctgcccaaagaatcctaaatttcaggagcct
gtaactctggacttcctggacgctgagctggaggatgagattaaagtagagataagaacg
aacatgattaatggagaaaccggccaccgcaccgtacacacactagtgaagtcccaggat
gagcggtacatagaccgaagcgaaagatcgtacacatatgcccctgtaaagggtacagat
tacagtctagccttggtccttccagtgtacagcctgcattacatccacactactatcgga
gacaccatcacccaggccaaattggaattgggggatgaggtctctgaaagcctgcaggaa
gacaagtttgaggagtatggatacactctcattgcaccaagggagtactgtaaggatctg
aagccgtctaaaaacaacacagagttcctgatggacttcaacgagtacatcgacaggaag
actcccaacaacccactgtgcaacgtggatctggtgaacagattgttactggacgctggg
atcacgtcagacctcgtcaagcagtggagagatcagatgccaaatggagtcctggccagg
tttgtggccactgatggaggaatcactcgcatttatcccaaaagtgctggactagactgg
acagaggacccagagacgtatgagtcaagcttgtataagaggagtctggacaatgacatc
tacatcttcacaccaacaccctaccaggaggacaccaacatgactgaggactcagtcctg
gtgagcagagcagtgaacctggacattgatggagtcagactcaaaccagcagttgtggga
gtgaaacttgacatcagtacctggatgaccaacttcatcaatgctactctgaagatgaac
tgtaaggacgagatctgtggttgtcagaggaatgatgagcatgtggactgtgtcatcctg
gatgatgggggattcctagtcatggccaatcgggatgaatacatcggtcagatcggccag
ttcttcgggatgatcgaccctatcctcatggtcaacctggtcaacatgtctctgttcaca
ctcaacaagacgtacgactaccagtcggtctgcgaccccaagagggagagcaaggggtcc
gcggcgggcctgcgctcagtctacgtgcccaccatagcagacattttgaacgttggatgg
ttagcatcagcagcagcctggtcgatactacagcagttgttggttagcatagcattccct
aatttcttgcacgcagcggatactgatgacgtaatacctgacatgtccaaggagagctgt
atcacggagcagactcaatacttctatgacaacgaggaaaagtccttcagaggaacgcta
gactgtgagaactgctccaggatgttccatgctgagaagctgtggaagaccaacctggtg
ttcgtcatcgctgacgccaagctcacctgcatgtcatgtgaccacaagcccttaatacag
gccgagcagccttctgagggaccagacccatgtgaaatggctgagaaaccaaggttccga
aaaggtccagatgcctgtttcgacaacaacgagagggaggaggactttgactgtggtggg
gcgtccgctctgagcccgtccctgttggccatggtggcgctgcagctggccctgctctgg
ctcctggccggctcaactcaccatgctgtcccctcgtga
DBGET
integrated database retrieval system
