Salmo trutta (river trout): 115183645
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Entry
115183645 CDS
T08542
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1-like
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04530
Tight junction
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115183645
09142 Cell motility
04810 Regulation of actin cytoskeleton
115183645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115183645
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
115183645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
RBD
PDZ
SOS1_NGEF_PH
PDZ_6
PH
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115183645
NCBI-ProteinID:
XP_029600612
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MFRCRCYLASLQGGELPNPKRLLAVASRATKQAMGRLGIFSVSSFHALVVVRTESAVRKR
SQAMPRPSSKRRSRFSSLWGLDTTSKKKVKGRPSINQVFVAGGEPVIKPTERMFEDTASE
KSKEEGSLKIIPQDSVDSEIWVPDYLAPSWVCLPNDQPVLAVIQPGETAEDTLDTVCKAH
KLDPSNFYLRLKVCVEEQLLLYVPKLEEDISDLLYKEIEIRPKTTKLIRFDKAESCTLGY
GFSIAVVDEEGTQQLHITEVKAGGLASAKGLLAGDEILLLNGKPASALGVLDMRSALVGP
SLSLSVSTLPTLDPRNLCPFPLRRSNTAEYDTCTDIYSQSQEDILDEVSGLTVVSPDDTL
EDESLLDLENSGPNQADYAETGQKSTEQVTAYCRSLHEMNPSHVPPQSSSSCSSSLSPSQ
SMPVAAGFAIQRQLSHADKLRKVISELVETERTYVKDLGCLIERYLTPLQKESFLTQDEL
DVLFGNLGEMLEFQVEFLKTLEDGTRLVADLDRLERVEQFKKVLFSLGGSFLYYADRFKI
YSAFCASHTKVPKVLAKAKTDADFKAFLAERNPKQQHSSTLESYLIKPIQRILKYPLLLR
ELYSLTDPESEEHYHLNVAMKAMNKVASHINEMQKLHEEYGAVFDQLINEMTADKKEVFD
LSMGDLLLHSTLVWINPPASLVKGKKDPELATFVFKTAVVFVYRDRSKQRKKLGGSHRPA
VADDRVPFLFRHMISTDALQVRARTNSEGTAVCEIVHVRSESEGRPERTFHLCCSSVDSK
KDFLKTVHSILRDKQRRQLMKTESLPPNQQYVPFGGKRLCNLKGNRPAMNRAVSAPSRTL
GRRKLVKNRFTIDTDLVLHDNHEDSDSNPSHSTHDHSQQPPHSHNPLLPTQKPQQRTLLV
TGGDTDRWVEEQFDLGCYDDQGGVTGEERRMEGGIEGRMEVKETDILSDDDEYCKSVRAS
SAEPSLLEERMEGATLEERSQDQDRGVEEEEEEGKKDERRQNGEVEEERRSSQGILQEDE
GGERGELQVDSDSTVPPPSRSPAPPGKLTPLRKQWAAEGVAGKQCSVERVAERDHCDVIW
VRREDYANGGNNDVF
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggtgtcgttgttacctggccagtctgcagggaggggagctgcccaaccctaaa
cgtctgctagccgtggcctccagagccaccaaacaggccatgggacgcctgggaatcttc
tcggtatcttcctttcacgcgctggtggtggtacgcacagagagcgcggtgaggaagcgg
tcccaggctatgccccgcccctctagtaaacgtcggagtcgcttctcttccctctggggg
ctggacaccacatctaagaagaaggttaaaggtcgacccagcatcaaccaggtgtttgtt
gctggaggggaaccagtgatcaaaccaacggagagaatgtttgaagatacggccagtgag
aaatcgaaggaggagggttcattgaaaattattccccaggacagcgtggacagtgagatt
tgggttcctgactacctggccccgtcctgggtgtgtctacctaacgaccagcctgtgcta
gccgtcattcaaccaggggagactgcagaagatacgctggacactgtctgcaaggcccat
aaactagacccgtcaaacttctacctgcgtctgaaggtgtgtgtagaggagcagctgctg
ctatatgttcccaaactggaagaagacatctctgatctgctctacaaagagattgagata
cgtcccaaaaccaccaagctaatccgcttcgacaaagctgagtcctgcacgttgggatac
ggtttctcaatagcagtagtagacgaggaggggactcagcagctccatatcactgaagta
aaggcaggaggactggcttctgctaaaggcctgcttgcgggtgatgagatcctgttgtta
aatggtaaaccggcgtcagctctgggcgtgttggatatgaggtcagcgttagtcggcccc
tcgttgtccctgagcgtgagcaccctgccgacccttgacccccgcaacctctgccctttt
ccccttcgacgctccaacacagcagaatacgacacctgtacagacatctattcccagagc
caagaggacattctggatgaggtatcagggttgacggtggtcagtccagatgatactctg
gaggatgagtcacttctggatctggagaattcaggacccaaccaggcggactacgctgag
acaggacagaagagtactgagcaggtgactgcatactgccggagtctccatgagatgaat
ccttcccatgttccccctcagtcttcctcgtcctgctcttcctccctctctcccagccag
tcaatgccagtggcggcgggctttgccatccagagacagctgtcacacgccgacaaacta
cgtaaagtcatcagtgaactggtggagactgagaggacctacgtcaaggacctgggctgt
ctgatcgagcgctaccttacccctttgcagaaggagagcttcctcacccaggatgagctg
gatgtcctgttcggtaacctaggagagatgctggagttccaggtagagttcctgaagact
ctagaagatgggaccagactggtagccgacctggacaggctggagagagtagaacagttt
aagaaagtgctgttctctctgggtggatcgttcctgtactacgccgatcgcttcaagatc
tacagtgctttctgtgccagccacaccaaggtccccaaggtcctggccaaagctaagaca
gatgcagacttcaaggcgttcctagcagagaggaaccctaaacagcaacactcttcaacg
ctggagtcctacctgatcaaacccatccagagaatcctgaagtatccactactactgaga
gagctgtactcactgactgaccctgagagtgaagaacactatcacctgaatgttgcgatg
aaggccatgaacaaggtggccagtcacatcaacgagatgcagaaacttcatgaggagtac
ggtgccgtgtttgaccagctcatcaatgagatgactgcagacaagaaggaggtattcgat
ctatccatgggagatcttctcctccactccaccctggtgtggatcaatcctccagcctcc
ctggtcaagggcaaaaaggaccctgagctggccaccttcgtgttcaagacagcggtggtc
tttgtgtacagagatcgctccaagcagaggaagaagcttggcgggtctcatcgtcctgct
gtggcagatgacagggtcccgttcctgttccgtcacatgatctcaacagacgccctacaa
gtccgcgcccgcacaaactcggagggtacagcggtgtgtgagatagttcacgtgaggtca
gagtctgaggggagaccagagagaacctttcacctgtgctgcagttctgtggacagtaaa
aaggacttcctgaagacagtccactccatcctgagggataaacaacgacgtcaactgatg
aagactgagtctctaccacccaaccagcaatatgtccccttcggaggcaaacgcctctgt
aacctcaagggaaacagaccagccatgaaccgagcagtctcagccccgtctcggaccctt
ggtcgcaggaagctggttaagaaccgattcaccattgacaccgacctcgttctccatgac
aaccacgaagactctgactctaacccctcccactctacccatgaccattcccaacagcct
ccacattcccataaccccctgcttcctactcagaagcctcagcagcggacgctgttggtg
actggaggcgacactgaccgctgggtggaggaacagttcgatctgggttgctacgacgac
cagggaggagtgacgggggaggagagaaggatggagggagggatagagggaaggatggag
gtgaaagagacggacattctgagcgacgatgacgagtactgcaagtcagtcagggcttca
tcagccgaacccagcctcctggaggagaggatggagggagcgactctagaggagaggagc
caagaccaggacagaggggtagaagaggaggaggaggagggaaagaaagatgagaggaga
cagaacggagaggtagaggaagaaaggaggagctcccagggcattctccaagaggacgag
gggggtgaaaggggtgagttacaggtagactctgactccaccgtccctcccccttcacgg
tcccccgccccgccgggtaagcttacccccctcaggaagcaatgggctgcggagggcgtg
gccgggaagcagtgttccgtggagagagtggccgagagggaccactgtgatgtcatctgg
gtgcgacgcgaagactacgccaacggagggaacaacgacgtcttctga
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