KEGG   Salmo trutta (river trout): 115184009
Entry
115184009         CDS       T08542                                 
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03440  Homologous recombination
stru03460  Fanconi anemia pathway
stru04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115184009
  09124 Replication and repair
   03440 Homologous recombination
    115184009
   03460 Fanconi anemia pathway
    115184009
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:stru01009]
    115184009
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stru04121]
    115184009
   03036 Chromosome and associated proteins [BR:stru03036]
    115184009
   03400 DNA repair and recombination proteins [BR:stru03400]
    115184009
Enzymes [BR:stru01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115184009
Protein phosphatases and associated proteins [BR:stru01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115184009
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115184009
  Multi subunit type E3
   BRCC complex
    115184009
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     115184009
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     115184009
    BRCA1-A complex
     115184009
    BRCA1-B complex
     115184009
    BRCA1-C complex
     115184009
    BRCA complex
     115184009
   FA (Fanconi anemia) pathway
    Downstream FA components
     115184009
SSDB
Motif
Pfam: BRCT zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 RING_XB3-XBAT31 zf-Nse BRCT_2 zf-RING_5 PTCB-BRCT zf-ANAPC11 zf-MIZ zf-RING_4 zf-rbx1 YafT zf-RING_6 RTT107_BRCT_5 U-box Baculo_IE-1
Other DBs
NCBI-GeneID: 115184009
NCBI-ProteinID: XP_029600868
Ensembl: ENSSTUG00000045585
LinkDB
Position
Unknown
AA seq 1513 aa
MQNFSRTSVLFDKFSCAAHEKMNTMKSPKAEDVRQGISVIWEILQCPICLELMSTPVSTK
CDHQFCKFCIMKLLDSSRRKEANCPVCKTKITKRSLQESPGFQKLAEGLQNMVQAYEHDT
CTNYFTGMSQMRRHMSVTETVQKKNGHDVSSDDVWATDRADGEDHEFPMSCSSTIAAKDG
FAKLMGLEDSCPVISDEGFDSGLGDIPPTTENDTDDSKATSTTEKRKAALEAEIPEVVER
APSRPQKLGKKITTHPQDPPCRPEKVGNQPVRRSSRNIKRESLTEMIDQNQKKSLEKVSE
WLMNNSSTEVNSEKEKNTEGSDDSVSLAGSCSASSPLEDNLRNKDESPKREERGKCLEEL
VFGAVYKRDRRGIRSFSPQNRAITEPPPPCPAEELPILKKIAKRRMRNKLIPADFVKRPR
SEESEDSVMDDRPEMTEPQDDSPNEHPKDTEENMLIDLTGELNSNSSDKQGEELDELPEG
DNKENEDVEDSPVFDVPLREPGRKSNKKMHGRWQGVDGDLQGKVKSENNEQKTPAKKKGE
NIKVEKNKAAKSLVLVGVGESGSDPKIPKSRPSGQTEVQMESYPSSEDPGSPIMRRTRRS
RRLQLFTEEVQGSNKKIGTATSTKVVVLDSDCNKMQQSEEAKANTDRDNVTCLQNQNTEK
SVRKNGCVLDEEMGGIENLDSSEKRSGEMIEAQKVNPIEESIVEIPRTGSPCHADIACSV
TMVPSSISTPEASVSCAVPESVNQSNPVIKPFDDLRSNVPQETSASQAKCIDLEEDDRND
SELDTEQLVKSFKATKRKSFHLGSPNIKRSTFWSNKENTTLTKTQENKHVGTDMEAGNGQ
GFSRTTECPTVQQESEKRTIFENSCCSDLSLPSSSPNNISREKAQRNCKRLRKSILTRPP
QDLVKSSNPDTNGKTQKQILSRLSGNSSKSALSPNKVTKSQMESPHQAVGSGLLFPAFSA
SKEDLPHPTPVASKQLRVPKGQQPYKVEGSMRKSPTELESSHGVGSETAVEPNKTWPENM
TGNMANTESSLTPDDLPIFQSVVIQEAERTKGSGVVSLHSPIKCTLKRRMAQRLESSSES
DCSGEEEELPSLAQIFRSSACPPTAEEEEEESVTLLKDHARDQGSYREAGDGTCAAAEDG
QRESSPLMCPSPEWVTTSQVSVDLFGTPEEAEGMAGDTGLTQESSQFSSECIATQQKVAM
QEELRRLERMMALVSEALQEKEQEPTEAKVNPGAPYPPALLQPDRSTVSAGLDLQTTLPC
GQGTRKRSASRESAQNIGGNAASPPPGLGDCEGLGPTPTAPCRTQHEGPGGTGAGRLGRQ
SGRSLRSSMRARPNQVSSVVRVHSGTKAPSAGLEVQDTPGFIQPANTPPSTHTPLREPAG
VKLVLVASGLSAPEQSMVKKFAKRMGGSVCSQVTSETTHVIMNTDGDLVCERTLKYFLGI
AGRKWVVSFQWISECFKQGTVLNETSFEVRGDVVNGHDHQGPMRARTTGDTSLLMKDYEI
CFQGPFTDMTTGK
NT seq 4542 nt   +upstreamnt  +downstreamnt
atgcaaaacttcagtagaacctcagttctttttgacaaattcagttgtgctgcacatgag
aaaatgaacaccatgaaatccccgaaggctgaagatgtcagacaggggatctctgtcatc
tgggagatcttgcagtgtccaatatgtttggaattgatgagcacacctgtgtctactaag
tgtgaccaccagttttgcaagttttgtataatgaagcttttggacagcagtaggagaaag
gaggccaactgtccagtttgtaagacaaagatcacaaaaaggagtttgcaggagagccct
gggtttcagaaattagcagagggattgcagaatatggtccaggcctatgaacatgacacc
tgcacaaactacttcactggaatgtcccagatgaggagacatatgagtgtcacagagact
gtgcagaagaaaaacggccatgatgtctcatctgatgacgtgtgggctactgaccgtgct
gatggcgaggatcatgagtttccaatgtcctgctcgtcaactatagcagccaaggatggc
tttgcaaagctcatgggtcttgaagattcttgccctgtcatttcggacgaggggtttgac
agcggcctaggtgacatacctccaaccactgaaaacgataccgatgactctaaagctacc
tccaccacagaaaaacggaaggcagcattagaggcagaaatacctgaggttgttgaaaga
gctccttcacgaccccaaaagcttgggaaaaagataaccactcatcctcaagatccacca
tgccgtcctgaaaaggtcggaaaccaacctgtaagacgatcttcgaggaatatcaaaaga
gagtccttgaccgaaatgattgaccagaatcagaagaaaagtctagagaaagtctctgag
tggctcatgaataattcctcaacagaagtaaactctgagaaggagaaaaacacagagggc
tccgatgactcagtttctttggcaggaagttgttccgcctcctcacccttagaggataac
ctcagaaataaggacgagagtccaaagagagaagagcgtggcaaatgtcttgaggagctg
gtatttggggctgtttacaaacgggatcgaagagggatccgcagtttttcaccacagaat
agagcgatcacagagcctccaccaccctgtccagctgaggaactcccgatcctgaagaag
attgccaaaaggaggatgagaaataaactgatacctgctgactttgtcaagagaccaaga
tctgaggagagtgaagacagtgttatggatgaccgaccagagatgacagaaccacaagat
gattctcccaatgaacacccaaaagatactgaagaaaatatgttgattgacctgactggg
gagctgaattccaatagctctgacaagcaaggagaagagcttgatgagttgccagaaggt
gacaacaaagagaatgaagatgtagaggacagtcctgtgtttgatgtgccactacgggaa
cctgggaggaagtcaaataaaaagatgcacggtaggtggcagggtgttgacggggattta
caagggaaagtaaagtcggagaataacgagcaaaaaacgcctgctaagaaaaaaggggaa
aacatcaaggtggagaagaacaaggcagccaaatccttagtccttgtgggtgtcggagag
agtggaagtgaccctaagatacctaagagcagaccgtcaggccagaccgaggttcagatg
gagagttaccctagcagtgaggacccaggaagcccgatcatgaggagaaccaggaggagt
cggaggcttcagctcttcacagaggaagtacaagggagtaacaagaagatcggcactgca
acatccacaaaggttgtcgttcttgattcagactgcaacaagatgcagcaatcagaggag
gcgaaagccaacactgacagggataatgtgacttgtttgcagaaccaaaatacagaaaag
tctgtaaggaaaaacggatgtgttttagatgaagaaatgggaggtattgagaacttggac
tctagcgagaaaagatccggtgaaatgattgaggcacagaaagtgaacccaattgaggag
tctattgttgaaatcccacgtacaggaagtccttgtcatgctgatattgcttgttcagtg
actatggtaccaagttcaattagtaccccagaggcaagtgtctcatgtgctgtgcctgag
agtgtaaaccaaagtaatccggttatcaaaccattcgatgacttgagatcaaatgtacca
caagagacgtcagccagccaggccaaatgcattgatctggaggaggatgacaggaatgac
agtgagctggacactgagcaactggtgaagagcttcaaagccaccaaaaggaagtccttc
caccttggtagtccaaatatcaagaggagtaccttctggtccaacaaggaaaatacaact
cttacaaagactcaagagaacaaacatgtcggcacagatatggaagcaggaaatgggcag
ggattttcaaggacaacggagtgtcccacagtccaacaggaatctgagaaaaggacaata
tttgaaaattcttgctgtagtgatttgagcctaccttcaagttcccccaataatatttca
cgagaaaaagcgcagaggaattgtaaaaggctcagaaaatccattcttaccagaccacct
caggatttagtgaagtcttcgaaccctgataccaatgggaagacccagaaacagattctg
tccaggctttctggcaacagctcaaaaagtgccctcagtcccaacaaagtcacaaaaagc
caaatggaatctccccaccaagctgtgggttctggtctgctctttccagcttttagcgcc
tctaaggaagatctaccacatccgacacctgtagcttcaaagcaacttagagtccctaaa
ggtcagcagccatacaaagtggagggcagcatgaggaaaagtccaacagaactggagagt
agccacggtgttggatcagagacggcagtggagccaaacaaaacgtggccagagaacatg
actggaaacatggccaatacagagtcctccttaactccagatgaccttccaattttccaa
tcagtagttatccaagaggcagagaggactaaaggaagtggtgtggtcagcttgcactct
cccatcaagtgcaccctaaagcggaggatggctcagagactggagtcttcctcagagtcc
gactgcagtggagaggaagaggaactgccttcccttgcgcaaattttcagatcttcggct
tgtccaccaaccgctgaggaggaggaggaggaatccgtcacattgctcaaagaccatgcc
agggaccaaggaagctacagggaggctggtgatggtacctgtgctgcagctgaagatggg
cagcgagagagcagtcctctcatgtgccccagtcccgaatgggtcaccaccagtcaggta
tctgtggacctgtttggaacaccagaagaagctgaaggaatggcaggtgacactggcctg
acacaggaatcatcacaattttcaagcgagtgtattgccactcagcaaaaggttgcgatg
caggaggagctgcgaaggctggagagaatgatggcgttggtgtctgaagcgctccaggag
aaggagcaggagcccactgaggccaaagttaaccccggggccccatatcccccagcgctg
cttcaaccagacaggtccacagtctccgcaggccttgatctccagacgaccctgccgtgt
ggccagggcaccaggaagagatctgccagcagggaaagtgcccaaaacattgggggaaat
gcagcctcaccgccccctggtcttggagactgtgagggccttgggcccacccccaccgcg
ccctgccgcacccaacatgagggacctggagggactggggcagggcggcttggcagacag
tcaggacggagcctaaggagcagcatgagagcgaggcccaaccaggtgtcgtcagtggtc
agagtgcacagcgggaccaaggctccctcagctgggctggaggtccaggatactccgggg
ttcatccagcctgccaacacacccccatcaacacacactccactgcgggaacccgctggg
gtcaagttggtgctggtagcatcaggactcagtgcacctgaacagtcgatggtgaaaaag
tttgccaagaggatgggaggcagtgtgtgttcacaagtgacgtccgagaccacccatgtc
atcatgaacacagatggtgatctggtgtgtgagcgcacgctcaagtacttcctgggcatc
gcaggcaggaagtgggtggtgagcttccagtggatttccgagtgcttcaaacaagggaca
gtcttaaatgagacatcatttgaggtgcgaggagacgttgtgaacggacatgaccaccaa
gggcccatgagagcacggaccacaggggacacaagtctgctgatgaaggattacgagatc
tgtttccaaggccctttcacagatatgaccactggtaagtaa

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