Salmo trutta (river trout): 115188892
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Entry
115188892 CDS
T08542
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
stru04145
Phagosome
stru04210
Apoptosis
stru04510
Focal adhesion
stru04520
Adherens junction
stru04530
Tight junction
stru04810
Regulation of actin cytoskeleton
stru04814
Motor proteins
stru04820
Cytoskeleton in muscle cells
stru05100
Bacterial invasion of epithelial cells
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115188892
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115188892
09143 Cell growth and death
04210 Apoptosis
115188892
09144 Cellular community - eukaryotes
04510 Focal adhesion
115188892
04520 Adherens junction
115188892
04530 Tight junction
115188892
09142 Cell motility
04814 Motor proteins
115188892
04820 Cytoskeleton in muscle cells
115188892
04810 Regulation of actin cytoskeleton
115188892
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115188892
05100 Bacterial invasion of epithelial cells
115188892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115188892
03019 Messenger RNA biogenesis [BR:
stru03019
]
115188892
03036 Chromosome and associated proteins [BR:
stru03036
]
115188892
03029 Mitochondrial biogenesis [BR:
stru03029
]
115188892
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115188892
04147 Exosome [BR:
stru04147
]
115188892
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115188892
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
115188892
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
115188892
NuA4 complex
115188892
Chromatin remodeling factors
BAF complex
115188892
PBAF complex
115188892
GBAF(ncBAF) complex
115188892
SWR1 complex
115188892
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
115188892
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
115188892
Exosome [BR:
stru04147
]
Exosomal proteins
Proteins found in most exosomes
115188892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
115188892
NCBI-ProteinID:
XP_029603576
Ensembl:
ENSSTUG00000049274
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaatcgccgcactggttgttgacaacggatccggtatgtgcaaagccggg
ttcgctggagatgacgcgcctcgggctgtcttcccctccatcgtcggtcgtcccaggcat
cagggagtgatggttgggatgggccagaaagacagctacgtgggagacgaggctcagagc
aagaggggtatcctgactctgaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggcaccagaggag
cacccagtcctgctcaccgaggcccccctcaaccccaaagccaacagggagaagatgacc
cagatcatgtttgagaccttcaacacccccgccatgtacgtggccatccaggccgtgttg
tccctgtacgcctctggccgtaccaccggtatcgtcatggactccggtgacggcgtgacc
cacacagtacccatctacgagggttacgctctgccccacgccatcctgcgtcttgatctg
gccggacgcgacctcacagactacctgatgaagatcctgacggagagaggttacagcttc
accaccacggccgagagggaaatcgtacgagacatcaaggagaagctgtgctacgtggcg
ctggacttcgaacaggagatgggaaccgccgcctcctcttcctctctggagaagagctac
gagctgcccgacggacaggtcatcaccattggtaacgagaggttccgttgtccggaggcc
ctcttccagccctccttcctcggtatggagtcttgcggtatccacgagaccacctacaac
tccatcatgaagtgtgatgtggacatccgtaaggatctgtacgccaacacagtgctgtcc
ggaggaaccaccatgtaccccggtatcgctgacaggatgcagaaggaaatcacctctctg
gctccctctaccatgaagatcaagatcatcgcccctccagagcgtaaatactccgtctgg
atcggaggctccatcctggcttctctctccaccttccagcagatgtggatcagcaagcag
gagtacgacgagtccggcccctccatcgtccaccgcaaatgcttctaa
DBGET
integrated database retrieval system