KEGG   Salmo trutta (river trout): 115191863
Entry
115191863         CDS       T08542                                 
Name
(RefSeq) lysine-specific demethylase 2A-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    115191863
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stru03000]
    115191863
   04121 Ubiquitin system [BR:stru04121]
    115191863
   03036 Chromosome and associated proteins [BR:stru03036]
    115191863
Enzymes [BR:stru01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     115191863
Transcription factors [BR:stru03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    115191863
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     115191863
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115191863
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     115191863
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD JmjC F-box Cupin_8 Roughex
Other DBs
NCBI-GeneID: 115191863
NCBI-ProteinID: XP_029605700
Ensembl: ENSSTUG00000044169
LinkDB
Position
4:complement(14560110..14580750)
AA seq 1350 aa
MEDKRRPRFSKRLRSGTRRRYHDDGISDDEIEGRRTFDLEEKLTSERFTSDRVKRMEGKD
LTFEYIQRGGLRDPIIFEKPDGLGIKMPDPDFSVNDVKIFVGSRRMMDVMDVSTQKGIEM
SMAQWRRYYETPPSQRDKLYNVISLEFSHTKLENLVQRPASVDIIDWVDNMWPRHLKERQ
RDSTNSITDMQYPKVQKYCLMSVQGCYTDFHIDFGGSSVWYHILRGGKVFWLIPPTPQNL
ELYEDWVLSGKQGDIFLGDKAQDCQRIELKQGYTFMIPSGWIHAVYTPVDTLVFGGNFLH
SFNIPMQLNIYSIEDRTRVPAKFRYPFYYEMCWYVLERYLFSLTNTSYLTPDFQKHSLGI
GLTRDPSTCESVNGHTQEEDEEEAPPTRGSKPGVKVHLTPFELEGLWNLLGKLESLPSQK
NCVPAGIHDAPALLHDIRALLKEHANDIPKLSYTGKPIVKWPKRPSWYQPPPPPPPVARP
KLSATVVTPRPQKPASSMSVLRRRRVRCKRCEACVRTECGDCNFCRDMKKFGGPGKLKQT
CVLRQCLAPGLPLSVVCEICAEGNQEGGEGPVFALTLMECSNCAQIAHPACLKVTGDGVV
NTDLPSCWECPKCVLGITDTESSGTDDDDDSGASVGLGPLSATALSSTQGPLGVSMEPGS
APGLGDEGWGRAILLHPGLVPNPPSSSWFSEAPLPSPGQLLLEQRGLKRAGRWASGRRKR
VKGDKNKMLHAKRKSSSYLDGHIAKIYRRHGHSRDDDSGSDDDDEGSRSGGGTGQKISGP
RPRGSGSASRRGYGTGRRGIWRGSSHRGAGRGSGLAPHSSLKMRRGRGDREGGRRERGGR
VRLRGGTRMQRRRDESEDDDDDDDDDDEGDDDSEEDRQHHHRQRHRRRRTDDEEDDDDEE
DDDEGDSSARDLEGEDEDVAGEDEEDDENRSDSEPEPPVLLVSDLNDDLLNGSYLTVTLQ
RPPRAKRHPGSIVPKLEAAMSPRTHGGGPGYVQHKTLWKTRHKNGTVAAGNGLAQPAKNP
VGRPPRHRINNPHGDTADRERERDTASHSSSDSSASPTPPPHSSHSPSSLLSLPSFKDVG
NEKGGEKEVWVAVFRYLSRAELASCMTVCKAWYKWSCDKRLWSGVDVSRCPSLSSQAVQG
IIKRQPTSLDLSWTPVSKKQITLLIHRLPGLKELMIAGCSWSSMSALSTPSLPCLRTLDL
RWAEGIKDTQIRDLVTPPGCDSRSRLRGCVALRLAGLDISDSTLRLILRHMPLLERLDLA
HCRDLTDQSVCLLTAAGTHTRNTLTEINLAGCNKLTDGCLAYLKRASGLALLDLRGCKGV
TRRGCEGFISDLSHCVLFCMTEEKLIQRIS
NT seq 4053 nt   +upstreamnt  +downstreamnt
atggaagataagcgtcgaccaagattcagcaagcggctgcggtcgggcacgcggcggcgc
taccatgacgatggtatctcggacgacgagatcgaggggaggaggacctttgacctggag
gagaagctgacgagcgagaggttcacctcagacagggtcaaacgcatggaggggaaagac
ctcacgtttgagtacatccaaagaggtgggttgagggacccgatcatctttgagaagcca
gacggactgggcatcaagatgccagatccagacttcagtgtgaacgacgtcaagatattt
gtcggcagcaggcgtatgatggatgtgatggatgtcagtactcagaagggtatagagatg
tctatggcccagtggagacgttattacgagacgcccccctcccagagggacaaactctac
aacgtcatcagcctggagtttagccacaccaagctggagaacctggtccagaggcctgca
tcggtggacatcatagactgggtggacaacatgtggcctcggcacctgaaggagagacag
agagactccaccaactccatcacagacatgcagtaccccaaagtgcagaagtactgtcta
atgagcgtgcagggctgctacacggacttccacatcgacttcgggggttcctcggtctgg
taccacatactgcggggaggcaaggtgttctggctgatcccacccacgcctcagaacctg
gagctgtatgaggactgggtgttgtcagggaaacaaggggacatcttcctaggagacaag
gcccaggactgtcagaggatagagctgaagcagggctataccttcatgatcccctcaggt
tggatccatgcggtctacactccagtggacaccctggtgtttgggggaaacttcctccac
agcttcaacatccccatgcaactcaacatctacagcatcgaggacaggacacgggtacca
gctaagttccgttacccgttttactatgagatgtgttggtacgtgttggagagatacctc
ttcagtctgaccaacacctcctacctcacgcctgacttccagaaacactccctgggtatc
ggtcttaccagggacccctccacctgtgagtcagtcaacgggcacacccaggaggaggat
gaagaggaggctcccccgacccggggctctaagcccggggtgaaggttcacctcacgcct
tttgagctggaggggctgtggaacctgctggggaagctggagtcgctgccctcacagaag
aactgtgtcccggcaggcatacacgatgctcccgctcttctgcacgacatcagggccctg
ctgaaggagcatgctaatgacatccccaaactgtcctacactggcaagcccatcgtcaag
tggcccaagaggccgtcgtggtaccagccccctccccctcctcccccggtggctcgtccc
aagctgtctgccacggtggtgaccccgcggccccagaagcccgcctcctccatgtccgtg
ctgcggcggcggcgtgtgcggtgtaagcgctgcgaggcgtgcgtcaggacggagtgcggg
gactgtaacttctgcagggacatgaagaagttcggagggccggggaaactgaaacagacc
tgcgtgctccgacagtgtctggcgccgggtctgcccctgtcagtggtgtgtgagatctgt
gcagaggggaaccaggagggaggagaggggccggtcttcgccctcaccctcatggagtgt
tccaactgtgcccagatagcccaccccgcctgcctcaaagtaacaggggatggtgtggtg
aatacagatctgcccagctgctgggaatgtcccaaatgtgttctgggaatcaccgacact
gagtcttcgggcaccgatgatgatgatgacagtggggcgtccgttggcctcggccccctc
tccgccaccgccctctcctccacccaggggcctctaggggtctccatggagccaggctct
gctcctgggttgggggacgagggctggggcagggcgatactgctacacccagggctggtt
cccaaccccccgtcctcctcctggttctccgaggcgccccttccctcccctgggcagcta
ctactagagcagcgcggcctcaagcgggcggggagatgggcaagcgggcgcaggaagagg
gtgaagggggacaagaataaaatgttacacgcgaaacgcaagtcttcttcgtatctcgac
ggtcacatcgccaagatttaccgtcgccatggtcacagccgagacgacgactcgggcagc
gatgatgatgatgaaggctccaggagcggaggaggcacgggacagaagatatccgggcca
cgccctcgcggcagtggctccgcctctcggagaggctacgggactgggaggcggggcatt
tggagaggctcctcccacagaggggcaggccgcgggagcgggctggcccctcactcctcc
ctgaagatgaggcgcggcagaggggatagagagggggggcgtagggagaggggcgggaga
gtgcgcctccggggaggcaccaggatgcagagacgcagggacgagtcagaggacgacgat
gatgatgatgatgacgacgacgagggagatgacgacagcgaggaagatcggcagcatcac
caccggcaacgccacaggcggaggagaacggacgacgaggaagacgacgacgatgaggaa
gacgacgatgagggagacagctcggcccgggacctggagggggaggatgaggacgtggcc
ggtgaagacgaggaagacgacgagaaccggtcagactctgaaccagagcctcccgtcctc
ctggtgtctgaccttaacgacgacctcctaaacggctcgtacctgaccgtgaccctacag
cgcccccccagggccaaacgccaccccggctccatcgtgcccaagctggaggccgccatg
tctcccaggacccacggcggcggtccaggttacgtccagcataaaaccctctggaagacg
cggcacaaaaacggcacggtcgccgccggcaacggcctggcccagcccgccaagaatcca
gtcggccggcctcctcgtcatcgcatcaacaatccccacggcgacacagcagacagggaa
agagagagggacactgcctctcattcctcctcggactcctcggcctcccccacccctcct
ccccactcctcgcactctccttcctcgctcctgtcgcttccctccttcaaggatgtagga
aatgagaaaggaggggagaaggaggtgtgggtggcggtgttccgttacctgagcagagcc
gagctggctagctgcatgactgtctgtaaggcctggtacaaatggagttgtgacaagcgt
ctgtggagtggtgtggatgtatcgcggtgtccctccctctcctcccaggccgtgcagggc
atcatcaaacgccagcccacctccctggacctttcctggacccccgtgtccaagaaacag
atcaccctgctcatacaccgcctgccaggtctgaaggagctgatgatagcaggttgctcc
tggtcgtccatgtcggccctgtccacccccagcctgccgtgcctccgtaccctggacctg
cgctgggcagaggggatcaaagacacccagatcagggacctggtcacaccaccaggttgt
gacagtcggtctcggctgcgtggctgtgtggcgctgcgtctagccggcctggacatcagt
gactccaccctgaggctgattctccgtcacatgcccctgctagagaggctggacctggcc
cactgcagggacctcacggaccagtccgtctgcctgctcaccgccgccggcacacacaca
cgaaacacactcacggagatcaacctcgcaggctgtaacaagctgacggacggctgtctg
gcctacctgaagagggcgtctggcctggcgctgctcgacctgcggggctgcaaaggtgtg
acgcggcggggctgtgagggcttcatctcggacctctctcactgcgtcctgttctgtatg
acagaggagaaactcatccagaggatatcgtaa

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