Salmo trutta (river trout): 115192444
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Entry
115192444 CDS
T08542
Name
(RefSeq) tumor necrosis factor ligand superfamily member 6-like isoform X1
KO
K04389
tumor necrosis factor ligand superfamily member 6
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04060
Cytokine-cytokine receptor interaction
stru04068
FoxO signaling pathway
stru04210
Apoptosis
stru04217
Necroptosis
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115192444
04068 FoxO signaling pathway
115192444
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115192444
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115192444
04217 Necroptosis
115192444
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115192444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115192444
04052 Cytokines and neuropeptides [BR:
stru04052
]
115192444
04090 CD molecules [BR:
stru04090
]
115192444
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115192444
Cytokines and neuropeptides [BR:
stru04052
]
Cytokines
Tumor necrosis fators
115192444
CD molecules [BR:
stru04090
]
Proteins
115192444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
115192444
NCBI-ProteinID:
XP_029606803
Ensembl:
ENSSTUG00000015047
UniProt:
A0A673YLH7
LinkDB
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Position
4:45180756..45183566
Genome browser
AA seq
271 aa
AA seq
DB search
MSGTQGYPYPQVFLVDSGRGPQPSVQPPGMLPCWSFPPAHERVMERGRVRGSRGLGSWSL
AIALLFLLLLVFGALGLGAYQIIKLQTQLDGIQQVREMNIEIDGRGPEKQVGDLPETDPN
RGKTAGRPAAHVIGRIEKHVSQNTLRWEPKAGRAFTEGGVVYRDGGLQVNETGLYHIYSR
VQFEANHCTPTDALVHSVFVRRPGNFKSLTLMEGHREGYCNLGSHGYVWTSGSYLGSTLK
LEKQDWLYVNVSHPAMLSHAHHANFFGLHKI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtacacagggctatccttacccccaggtgtttctagtggacagtggtagaggt
ccacagccgtcggtccaacctccaggcatgctgccctgctggtccttccctcctgcccat
gagagagtgatggagcggggcagggtgagaggcagcagggggcttggctcctggagcctg
gctatagctctgctgtttctgctgctgctggtgtttggggcattgggactgggtgcctac
cagataatcaaactacagactcaactcgatgggatacaacaggtgagggaaatgaacatt
gagattgatggtcgtgggcctgagaagcaagtgggtgaccttccagagaccgatccaaac
agagggaagacagccggcagacctgcagcacatgttataggccggattgagaagcatgtt
tcacagaataccttgcgttgggagccaaaggctgggcgggccttcacagaggggggcgtg
gtctatcgggatggcggtctgcaagtcaacgagactgggctctaccacatctactcccgg
gtgcagtttgaagccaatcactgcacccctacagatgccttggttcactctgtgtttgtg
agaaggccagggaatttcaagtctctcaccctgatggaggggcacagggagggctactgc
aacctgggctctcatgggtatgtctggacctcggggagttacctgggatccacactgaag
cttgaaaagcaggactggctatatgtgaatgtctcccatccagccatgctcagccatgct
catcatgccaacttctttggactccacaagatctag
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