Salmo trutta (river trout): 115192829
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Entry
115192829 CDS
T08542
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115192829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115192829
Enzymes [BR:
stru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
115192829
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115192829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
115192829
NCBI-ProteinID:
XP_029607564
Ensembl:
ENSSTUG00000011466
UniProt:
A0A673XWS7
LinkDB
All DBs
Position
4:complement(63130857..63140297)
Genome browser
AA seq
457 aa
AA seq
DB search
MEEKLYGSVPVPSEYLQQWIQSAQQLQALQGQYPGINHHHSPHYTEEPREERVMAHAHMA
VNDELMAQQEPANLVKAPAKKRGRTAQPKEPKPPKMPKPPKEPKAKPGPKPKKGKEGQEA
DGTQEKMDETVQKVRKKRDRFKGMTEDEVMSRTLTDILDYNLDYVIIGINPGLVAAYVGR
WFPGPGNHFWKCLFLSGFTDEQLNHMSDTSLPAKYKIGFTNMVARTTPGSKDLSTKELRE
GALILVEKLKKYKPLIAVFNGKCIYEMFCREMFGKKPKKLDFGLQPHKIPDCEVALYLMP
SSSARCAQFPRAQDKVHFYIKLRELRDQLRGVARTDDIQELEYTFDLGLAKEDAKRMAIK
EEAYDPGYEAAFGGAYGEGGPGPEEGQSNGNGHCNFSSAENTVSDAVEKADTSQLPASTA
AATEGQLPDGQWMMQSFADQIPDIGGSKEPQAWAGNV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctgtatggatcagtgcctgtcccttcggaatatcttcaacagtggatt
cagtcagctcaacagcttcaggctctgcagggccagtatccgggcatcaaccatcaccac
agtcctcactacacagaggaaccaagagaggagagagtcatggcacatgcacatatggct
gtcaatgatgagctcatggctcagcaagaacctgccaacttagtgaaagctccagcgaaa
aagagagggagaacggcacaaccaaaggaacccaagccacccaaaatgcccaagccgccc
aaggagcccaaggccaaaccgggccccaagcccaagaaaggcaaggagggtcaagaggct
gacggcacgcaggagaagatggacgagaccgtccagaaggtcaggaagaaacgagaccga
ttcaagggcatgacggaggatgaggtcatgagcagaactctgactgacatccttgactac
aacttggactatgtcattattggaatcaacccaggactggtggcagcctatgttggacga
tggttccctggccctggaaaccatttctggaagtgcctgttcttgtctggattcactgat
gagcagctcaaccacatgagcgacaccagcctgccagcgaaatataagatcggtttcacc
aacatggtggcaaggacaacgcctggaagcaaagacctctcaaccaaagagctacgtgag
ggtgccttaattcttgtcgaaaagctgaagaagtacaagcctctaatagctgttttcaat
ggaaaatgtatctatgaaatgttctgcagagagatgtttggaaaaaagcccaagaaactt
gactttggtctgcagccacacaagatacctgactgtgaagtggcgttgtatctgatgccg
tcgtccagcgcccgctgtgcccagttcccccgtgcccaggacaaagtacacttctacatc
aagctgagggaattaagagaccagctcaggggcgtggccagaacggacgacattcaggag
ttggagtacacctttgacctgggattggccaaggaggacgccaagaggatggcgatcaaa
gaggaggcatacgacccgggctacgaggcggccttcggtggagcatatggcgagggtggg
cctgggcctgaggagggccagagcaacggcaacgggcactgtaacttctcgtcggctgaa
aacacagtttcagacgctgtcgagaaggcagacacttcccaacttcctgcctccaccgcc
gctgctacagagggacaactcccggacggacagtggatgatgcagtcttttgctgatcag
attccagacattggtggctctaaagagccccaggcatgggcgggcaatgtataa
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