Salmo trutta (river trout): 115192833
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Entry
115192833 CDS
T08542
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115192833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115192833
Enzymes [BR:
stru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
115192833
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115192833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
115192833
NCBI-ProteinID:
XP_029607567
Ensembl:
ENSSTUG00000011520
UniProt:
A0A673XQM0
LinkDB
All DBs
Position
4:complement(63152701..63158836)
Genome browser
AA seq
436 aa
AA seq
DB search
MEEKQYTSLTVPTDYLQQWYQSTQQHPQAQHVMQYHNTGHMGHYMEGSREDRVMTELSVH
QDPPVHQELDFHHDFHQEPIVQHDQPVDTSQAPTPGKRKRGRPPKQKPGEGQPQEDYDQA
EALKKAKRTLNRFNGMSVDEVMAKTLPDIIDHNLDILIIGINPGLLSAYKGRHYPNPGNH
FWKCLFLSGLTDEQLNHMHDLSLPEKYGIGFTNMVERTTPGSKDLSSKEFREGGRQLVEK
LKKYKPLIAAFNGKCIYEIFSKEIFGVKAKKLEFGLQPYKIPETETVCYLMPSSSPRCAQ
FPRAQDKVHFYIKLKELRDKIKGVVSVAREVQETEYHFDLGLAKEDAKRMAIKEEQVDPE
YETCDGEREEARQSTSYCNISSTKETAMPSKDQAQATPLNHMPYDQWMTQSFADQIPDIS
CNSSNVAQPQLGAETF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagcagtatacgtcactgacggttcctacggattatctccaacagtggtac
cagtccacccagcagcacccccaagctcaacatgttatgcagtaccataacacgggtcat
atgggtcattacatggagggatccagagaggaccgggtcatgacagagctgtctgtccac
caggacccccctgtccaccaagagctggacttccatcacgacttccatcaagagcctatt
gtccaacatgatcagcctgtagatacatcacaagctccgacgccagggaagagaaagaga
ggtcggcctcccaaacagaagccgggggagggccaaccacaggaggactacgatcaggca
gaggccctgaagaaagccaaaaggacccttaaccgtttcaatggcatgtcagtggatgag
gttatggccaaaaccctgccagatattattgaccacaacctggacattttgataattggt
atcaatccaggactgttgtcagcctacaagggacgacattacccaaacccaggaaaccat
ttttggaaatgcctgttcctctctggtctcactgatgagcagctcaaccacatgcatgat
ctgagcctgccggagaagtatggcattggctttaccaacatggtggagaggacaacgcca
ggaagcaaagacctctcaagcaaagagtttcgtgaaggaggccggcaattggtggagaag
ctgaagaaatacaagccactaattgcagctttcaacggaaaatgtatttacgaaattttc
agcaaagagatctttggagtgaaggcaaagaaactcgagtttggcttacagccgtacaaa
atcccagaaaccgaaacagtgtgctacttgatgccctcgtcaagcccccgctgtgcccag
ttcccccgcgctcaggacaaggttcacttctacatcaagctgaaggagctacgggacaag
atcaaaggtgtggtctcagtggcccgcgaggtgcaagagactgagtaccacttcgacttg
ggacttgccaaagaggatgctaagaggatggccatcaaggaggagcaggtggatcctgag
tacgagacctgcgacggggagcgcgaggaggcaaggcaaagcacaagctactgcaacatt
tcctccaccaaagagaccgcaatgcccagtaaggaccaagcccaagctacaccattgaac
cacatgccatacgaccagtggatgacccagtcgtttgcagaccagataccggacattagc
tgtaacagtagcaatgtagctcaacctcagttgggagcagaaaccttttga
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