Salmo trutta (river trout): 115193820
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Entry
115193820 CDS
T08542
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115193820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115193820
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
115193820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF
EGF_3
hEGF
Plasmod_Pvs28
EGF_MSP1_1
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
115193820
NCBI-ProteinID:
XP_029608727
Ensembl:
ENSSTUG00000000479
LinkDB
All DBs
Position
5:complement(20131672..20256255)
Genome browser
AA seq
1766 aa
AA seq
DB search
MAWIRWDLLFSLGLFMSPAFVSTDQSGFRRYYVLQPGPSGTDRVHVSSISSRSSATGQPH
AYNVELTASYGSQVRTRRMGNQANPIPLRQDTQFTQHQQVIRQTSHNVHQSHQMKISGVN
VCGGQCCHGWSKASGSQRCTKPNCLPQCQNGGMCLRPQLCVCKLGFNGKACEQKTKPTSS
IPAQPGNGHTNGHTNGRSIVPRRPIPQQVPIPQQGYAPVPVSNMAQMTLTVKQSPHLVRP
QQSRPGSQQFVLKPKYYNTHTTHSQTHVQHQPDRPIPLTGEHYPIHAGNHTGRIKVVFTP
TICKVTCTGGRCQNNCELGNTTTIVSENGHAADTLTAPNFRVVVCHLPCMNGGKCSARDK
CQCPATYTGRFCQMPVQNGNGQQRQKGQQQTSQIHSTHTLPLTFSNGQNPVKYAPSIVNI
HVKHPPEASVQIHQVSQLDANGQKVKGNGQNGQSQTQSRYTYHHSDSRQNIQQQGHNIIY
PNQQSYVPQYQPVSSKSQLGRCFQETTGTQCGKALPGLSKQEECCQSIGTSWGFHKCQKC
PKPSIPLTAGGSRHAMDCPQGYKRINNSHCQDLNECQLQGVCPNGDCLNTMGSYRCSCKV
GFIPDPTLSTCIPDTSAVHEEKGACFRLVSSGKQCLHPVSAQLSKQLCCCSVGKAWGPRC
DKCPLPGTAKFKEICPGGMGYTVTGSYKPKPPNKLPSQPETINKPMITHQERVAPPLPLP
THEKPVEALSVAERQLPSVPVATDAPEQELVILEATSSSPIVEAEAGQPQLSPGVSTMRM
EPAYKEVVEETSPPAPALILPTNAGQDIAPSQSAEVDECKVNPHICGQGLCYNSAEGYTC
ICNQGYQMDETHTTCVDVDECLDSASLCSNGRCKNTPGSFLCVCQAGFMTDEEGTSCIDL
NECLNTHTCPEDDFCVNTVGFYTCLHCDSGYRMSPTGQCEDINECLDLGVCPSGLCINFP
GSYECDLCPKGFQGQGGQCVDVDECLFPSTCANGRCSNFEGYFVCLCNDGFTLSLDGQSC
EDVDECLDPSTCANGRCSNFEGYFVCLCNDGFTLSLDGQSCEDVDECQDEQVCTRGHCQN
TEGSFLCNCGPGFRASAAGDQCDDVDECQELIVPCDGVGQCVNNMGSYHCRCPQGYQQIN
GTSCLDVDECLDDPELCSPHGECLNAEGSFYCVCERGFAASQDKHTCEDVDECLDGTRCV
GGSCENSQGSYRCQCDTGYRLQADTDTCLDIDECSELGRSICGAWRCENTEGSYRCVVDC
PPGHSHGPEGICMDIDECSANATACGIRGFCENTVGSFRCLCDRGYQESQEGLGCVDVNE
CDLLSGVCGEALCENVEGSFLCMCPDEDQEYNQMTAKCSPAPTASSVERKECYYNLNDEN
LCENVLTSSVTMEECCCTLGAGWGDNCEVHPCPVQGTDQFSQMCPAGRGSVPTGDTVFGV
TAAESYKDADECALFGQEICKDGFCFNSPGSYECYCKNGLYYDEVKLQCRDIDECQEESS
CVEGECLNTQGSYMCFCTHPLVLDSDNKSCVIAPEVAEQHGEQTGYQGVCWQTVTDNLTD
TLTDTLTCTKPLANRKTTYTECCCLFGEAWGMDCTLCPLKNTEDYASMCNVAMSGGQGRP
YGRDALVAGPVQEYEVSLDYEPHPDQPGALPLYEDEENLSDAFEGLRAEECGILNGCENG
RCVRVQEGYTCDCFDGYTLDMSRMACLDVNECSELNNRMSLCKNSKCINTQGSYKCVCLP
GYTPSERPNYCVAREQGEAAAATERE
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatcagatgggacctcttgttttctctaggtttattcatgtcaccagcgttt
gtgtccacggatcagagtggctttaggagatactacgtgttgcagccaggtccgagcggg
acggacagggtacatgtgagttccatttcttcgcgctccagtgccacgggacagccccat
gcctacaacgtggagctcacggccagttacggtagccaggtccgaacccgtaggatgggt
aaccaagcgaacccgatcccgcttcgccaggatacacagtttactcagcaccagcaagtc
attcggcagaccagccacaacgttcaccaaagtcaccaaatgaaaatttcaggggtgaat
gtctgtggagggcagtgctgtcacggatggagtaaggcctctggatcgcagcggtgcacc
aagcccaactgcctgccccagtgccagaatggaggaatgtgtctgaggccccagctctgt
gtctgcaagctaggcttcaatggcaaggcatgtgaacagaagaccaagcccacctcctcc
atcccagcgcagccagggaacggccacaccaatggacacaccaatggccgtagcatagtg
ccccggaggcccattccccagcaggtgcccatcccccagcagggttatgccccagtccct
gtcagcaacatggctcagatgaccctgaccgtcaaacagtccccccaccttgtccggccc
cagcaaagccgacctggtagccagcagtttgtcctgaagcccaagtactacaacacacac
accacacactcccagacgcacgtccaacaccagcctgacagacccattcccctgacgggg
gaacactaccccatccatgcggggaaccacacgggccggatcaaggtggtcttcacaccc
accatctgcaaggtgacctgcacggggggccggtgccagaacaactgtgagctgggcaac
accaccaccatcgtcagcgagaacggccatgccgcggacaccctcaccgcccccaacttc
agagtagtggtatgccatctgccctgcatgaatggaggaaagtgcagtgccagggacaag
tgtcagtgcccggctacctatacggggaggttctgccagatgcctgttcagaacgggaat
gggcagcagcgccagaaagggcagcagcagacgtcccagattcactccactcacactctg
cccctcaccttcagcaatggacagaaccctgtgaaatatgcccccagcatcgtgaacatc
catgtgaagcatcctccggaggcctcggtgcagatacatcaggtctcccagctggatgcc
aatgggcagaaggtgaaaggcaatgggcagaatggccaatcccagacccagtctcgctac
acctaccaccactcagacagcagacagaacatccagcagcagggacacaacatcatctac
cccaaccagcagagctacgtcccccagtaccagcccgtctcctccaagagccagctggga
cgctgcttccaggagaccaccggcacacagtgtggcaaggccctccctggtctcagcaag
caggaagaatgctgtcagagcatcggaacatcctgggggttccacaaatgccagaagtgc
ccaaaaccatctattcctctgacagcaggaggatccagacacgcgatggactgcccccag
ggatacaagcgcatcaacaactcccactgccaagatcttaacgagtgccagctgcagggc
gtgtgtcccaacggagactgtctgaacaccatgggcagctacaggtgcagctgtaaggtc
ggcttcatccctgaccccaccctctccacctgtatccccgacacctctgccgtccacgag
gagaaaggggcttgtttccgattggtcagttcggggaagcagtgtttgcacccggtgtct
gctcagctgagcaaacagctgtgctgctgcagtgtgggcaaggcctggggcccgcgctgc
gacaagtgccccctgccaggaacagctaaattcaaggagatatgccctggtgggatgggc
tacactgtcacgggatcttacaagcccaaaccacccaataaactacccagccaacctgag
accatcaacaagccaatgatcacccaccaagagcgtgtggccccgcctctgcccctgccg
acacatgagaaaccagtggaggccttgagcgtcgctgagagacagcttccctctgtacca
gtagccacagatgcacctgagcaggagctggttattctggaggctactagtagtagtcca
atagttgaggccgaggccggccagccacagctctctcccggtgtctctaccatgaggatg
gagccggcctacaaagaggtggtggaggaaacgtccccccctgctccggccctgatcctc
cccaccaacgctggccaggacatcgccccttctcagtcagcagaggtggatgagtgcaag
gtgaaccctcacatctgtggccaggggttgtgctacaactctgccgagggttatacctgc
atctgtaaccagggctaccagatggacgagacacacaccacctgtgtagatgttgatgaa
tgcctggattctgcatcactgtgctccaacggccgctgcaagaacactcccggcagcttc
ctgtgtgtgtgccaagcaggcttcatgacagatgaggagggaaccagttgcattgattta
aacgagtgtctgaacacccacacgtgtcctgaggatgatttttgtgtcaacaccgtgggt
ttctacacctgtttgcactgtgacagcggctacaggatgagcccgacaggccagtgtgaa
gatataaatgagtgtctggacttgggtgtgtgtccgtccggcctgtgcatcaacttccca
ggctcgtatgagtgtgatctgtgtccaaagggcttccagggccagggaggacagtgtgtc
gacgtagacgaatgcctgttcccgtcaacttgtgccaacgggaggtgctccaactttgag
ggatactttgtctgcttgtgtaacgatggattcacgctcagcttagatggacaatcatgt
gaagatgtagacgaatgcctggacccgtcaacttgtgccaacgggaggtgctccaacttt
gagggatactttgtctgcttgtgtaacgatggattcacgctcagcttagatggacaatca
tgcgaagatgtggatgagtgccaggatgagcaggtgtgtaccaggggccactgccaaaac
actgagggctctttcctctgtaactgtgggcccggcttcagggcttctgcggcaggggac
cagtgtgacgatgtggatgagtgccaggagctgatcgtgccctgtgacggggtgggccag
tgtgtcaacaacatgggctcctaccactgcagatgcccccagggctaccagcagatcaac
ggcaccagctgcctagatgttgacgagtgtctggacgacccggagctgtgctccccacac
ggggagtgtctcaacgctgagggctccttctactgcgtctgcgagagaggcttcgccgcc
agccaggacaaacacacctgtgaagacgtggatgagtgcttggatggcaccaggtgtgtt
ggcggctcctgtgagaacagccagggttcctacagatgccagtgtgacactggctaccgc
ctgcaggcagacactgacacatgcctggatatcgacgagtgttcagagttggggcggagc
atctgtggggcgtggcggtgtgagaacacggagggctcctataggtgtgtggtggactgc
ccccctggacacagccatggcccagagggcatctgtatggacattgatgagtgcagcgcc
aacgccacggcgtgtggcatccgcggcttctgtgagaacacggtcggatccttccgctgc
ctgtgtgaccggggctaccaggagtcccaggagggcctcggttgtgtggatgtcaacgag
tgtgatctgctgagcggtgtgtgtggcgaggccttgtgtgagaacgtggagggctccttc
ctgtgtatgtgccccgacgaggaccaggagtacaaccagatgaccgccaagtgcagtccc
gctcccacagcctcgtcagtggagaggaaggagtgctattacaacctcaatgatgagaat
ctgtgtgagaacgtgctgaccagcagtgtgaccatggaggagtgctgctgtacgctgggg
gcaggatggggggacaactgtgaggtgcacccctgccccgtccagggcactgatcagttt
tcccagatgtgtccagctgggagaggcagtgtcccaaccggtgacactgtgttcggtgtg
actgcagccgagagttataaagatgcagatgagtgtgcgttgtttggccaggagatctgt
aaggatggcttctgcttcaacagcccaggaagctacgagtgttactgtaagaatggcctg
tactacgacgaggtcaagctgcagtgcagagatattgatgagtgtcaggaggagtctagc
tgtgtggagggagagtgtttgaacacacagggctcctacatgtgtttctgtacacacccg
ctggtgttggactctgacaacaagagctgtgtgatcgcccctgaagtggcagagcaacat
ggtgagcagactggctaccagggtgtttgctggcagacggtaacagacaatctgacagac
actctgacagacactctgacctgcaccaagccccttgccaacagaaagaccacgtacaca
gagtgttgctgtctgtttggagaggcctggggcatggactgtaccctctgccccctcaag
aacacagaggactatgcctccatgtgtaacgtggcaatgagtggaggacaggggcgtccg
tatggtcgtgatgccctcgtggccggccctgtccaggagtacgaggtcagcctggactac
gagcctcaccccgaccagcctggcgccctgcccctgtacgaggacgaggagaacctgtcc
gatgcgtttgagggcctgagagcggaagagtgtggcattctgaacggctgtgagaacggg
cgctgcgtgcgggtacaggagggctacacctgcgactgcttcgacggatacaccctggac
atgtcccgcatggcgtgtttggatgtgaatgagtgctctgagctcaacaaccggatgtcc
ctctgcaagaactccaagtgtatcaacacgcagggatcctacaagtgtgtgtgcctgccg
ggatacaccccctctgagcggcctaactactgtgtggccagggaacagggggaggcagca
gcggccacagagagggagtga
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