Salmo trutta (river trout): 115194158
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Entry
115194158 CDS
T08542
Name
(RefSeq) transcription factor p65-like isoform X1
KO
K04735
transcription factor p65
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04137
Mitophagy - animal
stru04210
Apoptosis
stru04218
Cellular senescence
stru04620
Toll-like receptor signaling pathway
stru04621
NOD-like receptor signaling pathway
stru04622
RIG-I-like receptor signaling pathway
stru04623
Cytosolic DNA-sensing pathway
stru04625
C-type lectin receptor signaling pathway
stru04920
Adipocytokine signaling pathway
stru05132
Salmonella infection
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115194158
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115194158
09143 Cell growth and death
04210 Apoptosis
115194158
04218 Cellular senescence
115194158
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115194158
04621 NOD-like receptor signaling pathway
115194158
04622 RIG-I-like receptor signaling pathway
115194158
04623 Cytosolic DNA-sensing pathway
115194158
04625 C-type lectin receptor signaling pathway
115194158
09152 Endocrine system
04920 Adipocytokine signaling pathway
115194158
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115194158
09171 Infectious disease: bacterial
05132 Salmonella infection
115194158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115194158
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
115194158
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
115194158
NCBI-ProteinID:
XP_029609467
Ensembl:
ENSSTUG00000047129
LinkDB
All DBs
Position
5:complement(41393851..41402386)
Genome browser
AA seq
612 aa
AA seq
DB search
MDGIYGWEQPPLNQGNPFIEIIEQPKQRGMRFRYKCEGRSAGSTPGEKSNDTTKTHPAIK
VHNYNGPLRVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVKK
KDVAEAVSCRLQTQNNPFNIPEANVWEEFDLNAVRLCFQASITLPTGELFALEPVVSQPI
YDNRAPNTAELKICRVNRNSGSCRGGDEIFLLCDKVQKEDIEVRFFQDAWEGKGTFSQAD
VHRQVAIVFRTPPYCDTNLTEPIRVKMQLRRPSDREVSEPMDFQFLPSDPDEYRLMDKRK
RTEGMLQNLKLGSLMSGAMPAETRPFNIARRTVTAKPAASQPVMNPVAPPSAVSVKPQPY
YNGPQLGQLFQTKPKAEASTIAETWKFLNSLTLDSQPKATPVASFITNPQASVATAASSQ
DFPTVNLLDLHGYAFHTVASPQEPVSAAATTEPTSTFGVQGSQFKVDEELPEFPSFSEAQ
PTGTLDSINIDDFQAMLGQSCLAGEGPKSSEASAPQAPCHLPSTNTVANTVAQNQADPAN
HHISCDGSTWMNYPNSIVNLLQNESMMDSSPGNASQPAALDDLDVLSSMDEDHLMSILNS
GNQYTFVSEHQT
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatttatggatgggaacagccccctttgaaccaaggtaatcccttcatagag
atcattgaacagcccaagcagaggggcatgaggttcaggtacaagtgtgaggggcgctct
gcgggaagcaccccgggagagaagagcaatgacaccaccaagacacaccccgccattaag
gtgcacaactacaatggccccctgcgtgtccgcgtctccttggtgaccaagaacccacct
cacaagccccacccccacgaactggtggggaaagactgcaaacatggctactatgaggca
gacctgcaggagagacgagtacacagttttcagaacctgggcattcagtgtgtgaagaaa
aaggatgtggccgaggcagtttcctgtaggctgcagactcaaaacaaccccttcaacatt
cctgaggcgaacgtgtgggaggagtttgacctaaatgcagtgaggctgtgtttccaggcc
tcgatcactctgcctaccggggaactcttcgctctagagcccgtggtgtcccagcccatc
tacgacaacagagcacccaacacagcagaactgaagatctgtcgagtgaacagaaactct
ggaagctgcagagggggggatgagatcttcttactttgtgacaaagtgcaaaaagaggac
attgaggtgcggttcttccaggatgcgtgggaggggaagggcaccttctcccaggcggat
gtccacaggcaggtggccattgtgttccgcacccctccctactgcgacaccaacctgacc
gagccaatccgagtgaagatgcagctccgcaggccctcggaccgtgaggtcagcgagcca
atggacttccagttcctgccctccgacccagatgaatatagactgatggataagagaaaa
cggacagagggaatgttacagaatctgaagctggggtccctgatgtcaggggccatgcca
gcagagacgaggcctttcaacattgccaggagaacagtcaccgctaagccagcagctagc
cagcctgtgatgaacccagtggcgccccctagtgctgtctctgtgaagccccagccctac
tacaacggcccccagctaggccagttgtttcaaaccaagcccaaagcagaagcctccacc
atagccgagacctggaagttcctcaacagcctgaccctggactcccagcccaaagccacc
cccgtggccagcttcatcaccaacccccaggcctctgtagccacagccgcctcctcccag
gactttcccaccgtaaacctgttggacctccacggatacgctttccacaccgttgctagt
ccccaggagccggtgagtgcagctgctaccacagagcccacctctaccttcggggtgcaa
ggctcccagttcaaggtggacgaggagctacccgaattccccagcttttctgaggcacaa
ccgaccgggactctagatagtataaacattgacgacttccaggctatgctgggtcagagt
tgtctggctggagaagggccaaagagcagtgaggcgtcagcccctcaggcaccctgccac
ttaccttccaccaacactgtggccaacactgtggcccagaaccaagcagacccagccaac
caccatatcagctgtgacggcagcacctggatgaactaccccaacagcattgtcaacctg
ctccagaacgagagcatgatggacagttcccccggcaacgccagccagccggccgccctt
gacgacctggacgtcttaagctccatggacgaagaccatctcatgtccatcctgaacagt
ggcaaccaatacacttttgtgtccgaacatcagacctga
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