Salmo trutta (river trout): 115194744
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Entry
115194744 CDS
T08542
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115194744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115194744
04121 Ubiquitin system [BR:
stru04121
]
115194744
Membrane trafficking [BR:
stru04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
115194744
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115194744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
EIF3I
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_WDHD1_1st
F-box-like
WD40_CDC20-Fz
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR55
F-box
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_EML
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Ge1_WD40
Beta-prop_IFT122_1st
DUF4820
PQQ_2
Motif
Other DBs
NCBI-GeneID:
115194744
NCBI-ProteinID:
XP_029610518
LinkDB
All DBs
Position
5:complement(62504533..62550674)
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AA seq
488 aa
AA seq
DB search
MKQDPVTKGDDKATSCPGRIDSIGEERRKGDEEFICREEEEEGEVVSVSIVTIAEESCPS
EPFGTVAHVEVAANESAVRDGDCRSKTSQSTQTEEEEKHEEEEEEEEMAEDESDHSALLQ
EEEDEEGRNQVFVSDDNLGLSDSLTPGIPTLLNIKMKRKLDHGPDVRPFSSGKKHCKGSN
YLSPSSLVPFQTTPTTFGDLRAANGHSAQRRRVTSGPPPSGLQDWLHTFQAWSGSERLLA
LDDLIDSCESNQVKHMMQVIEPQFQRDFISLLPKELALYVLTFLEPRDLMQAAQTCSYWR
ILAEDNLLWREKCREEGIEEPLVVKRRKTLKPGFLHSPWKSAYVQQHRIESNWRTGDITS
PKVLKGHDDHVITCLQFCGDLIVSGSDDNTLKVWSALTSKCLRTLVGHTGGVWSSQMSGN
IVISGSTDRTLKVWDAETGDCLHTLYGHTSTVRCIHLHDKQVVSGSRDATLRLWDVDSGE
CLHVLTGH
NT seq
1465 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggatccagtgaccaagggtgatgacaaagctacatcctgtccaggaaggata
gactctattggggaagaaaggagaaagggagatgaggagttcatttgtcgagaggaggag
gaagagggggaggtggtcagcgtttctatagtgaccatagcggaggagtcctgcccttcg
gaaccgtttggaactgtcgcccacgtggaggtagcagccaatgagagtgcggtgagggat
ggagactgccgatcaaaaacttcccaaagtacccagactgaagaagaggagaagcatgag
gaggaggaggaggaagaagagatggctgaagatgagagtgaccattctgccctgttgcag
gaggaggaggatgaggagggaaggaaccaggtgtttgtctcggatgacaacttggggttg
tcggacagtctgacccctggaataccaacactcctcaacatcaagatgaagaggaagttg
gaccatggaccagacgtcaggccgttctcttcaggcaagaaacactgcaaaggttccaac
tacctcagtccctccagtctcgttccattccagaccacgcccactacctttggagacctg
cgagcagccaatgggcattcagctcagcggagacgtgtcacctcaggcccgcccccctcc
ggcctacaggactggcttcacaccttccaggcgtggagtggttccgagcgcctattggct
ctggatgacttgattgacagctgtgagtccaatcaggtgaagcacatgatgcaggttatt
gagcctcagttccaacgagacttcatctccctgctgcccaaagagttggccctgtatgtc
ctgacgttcttggagcccagagatctgatgcaggctgctcagacctgttcctattggagg
atactggctgaggacaacctgctgtggagggagaagtgtagagaggagggtatagaagag
cccctggttgtgaagagaagaaagactctaaaacctgggttcctccactcaccctggaag
agtgcctacgtacaacaacacaggatagagagcaactggaggactggagatatcacctca
cctaaggtcctgaagggtcatgatgatcatgtgatcacatgtctgcagttctgtggcgac
ctcatcgtcagtggatctgatgacaacactctgaaagtctggtctgccctgaccagcaag
tgtctgcgtacattagtaggccatacaggaggtgtgtggtccagtcagatgagcggtaac
atagtgatcagtgggtcgactgacaggactctgaaggtttgggacgcagagactggagac
tgtcttcacaccctgtatggacacacctctactgtacgctgtatacacctgcatgacaag
caggttgtgagcggtagccgcgacgctacactgcgtctgtgggacgtagattctggcgag
tgtctccacgtcctgacgggtcatg
DBGET
integrated database retrieval system
