Salmo trutta (river trout): 115197760
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Entry
115197760 CDS
T08542
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115197760
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115197760
04261 Adrenergic signaling in cardiomyocytes
115197760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115197760
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115197760
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
Cache_3-Cache_2
VWA_CoxE
DUF2201
Motif
Other DBs
NCBI-GeneID:
115197760
NCBI-ProteinID:
XP_029615423
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Position
7:complement(788658..870011)
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AA seq
1033 aa
AA seq
DB search
MNVRACVWTGSWRLAMDTYRPHAVLILLLLSSDICLPSQFPTQLIIKEWVDQMQIELVTL
ADMASAGKNLTQIFLDNQNLYTVESNDAEELVARAARNIEQLLLKRAAALETLGFVSGSQ
TTIVLNELNWTEALEGVFKKNREDDPTLLWQVFGSATGLARYYPASPWMDARKTPSKIDL
YDVRRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVGEMLETLSDDDYVNVVYFN
TRVNNTACFDHLVQANVRNKKILKDAVQNISAKGITNYTKGFEFAFEQLYATNVTRANCN
KIIMLFTDGGEERASAILQKYNADKKVRIFTFSVGQHNYDKGPVQWMACANKGYFYEIPS
IGAIRINTQEYLDVLGRPMVLADQLAKQVQWTNVYLDALELGLVITGTLPVFNKTKYKDE
SGLEIQNQLILGVMGIDVSLDDIKKLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNPKF
QEPVTLDFLDAELENDIKVQIRRMMIDGNPGEETIETLVKTQDERYIDRGERTYTWAQVN
GTDYSLALVLPTYSEHYIQAKLGDTIRQAMGQKAMNTLQVEMFDELGYTFIAPREYCKGL
KDKDNSTQFLLDFNQFIDRNTLEEPCNVTLVSRLLLDAGLTADLVKLWKEQTLGGILARF
VATDGGITRVYPRSAGEEWTENAETYDSSFYKRTLDNSIYIFTAPYFNKSRESGYESGIL
VSKAVDLNIDGVNLKPAVVGVKLNVSAWMNSFMNATIKVNCKDEICGCLKNDKHVDCVIL
DDGGFLLMSNQDEYITQIGQFFGEVDPVVMISLVNTSLYSFYKTYDYQSVCDPERDSKAA
AGPRSVYVPTIADMLSIGWWASTAAWSIIQQLFYGLIFPSFLEAADSDDDMSANMFKESC
ITEQTQYFFDNEERSYSGVLDCGNCSRMYRAEKLPNTNLVFLITDAKATCLSCDPRPLRQ
AEQPSQGPDPCELAQNPRYRKGPDVCFDNNIDDEPLCPISGVSGLSPVPLLLLLQVLMLG
PGRMILTVGVGPL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcgtgcgtgtgtttggacggggagttggcgcctggcaatggacacctacaga
ccacacgccgtgttgattttactgttattatcgtcggatatttgtctgccgtcgcagttt
ccaacacaactcataataaaggaatgggtggatcagatgcagatagagctggtgaccctg
gcagacatggccagcgccgggaagaacctcacacagatcttcctggacaaccagaacctg
tacacagtagagtctaacgatgctgaggaactagtggctagggcagccaggaacatagaa
cagctgctactgaagagggctgcagctctggagactttgggcttcgtgtcgggctctcag
accaccatcgtgctgaatgagttgaactggacggaggcactggagggtgtgtttaagaag
aacagagaggatgaccctactctgctctggcaggtgtttggtagtgctactggactggcc
cgatactacccagcctctccatggatggatgctcggaagacccccagtaaaatcgacctg
tacgacgtacgcaggagaccctggtacattcagggagctgcctcacccaaggacatgctg
atcctagtggacgcgagtggcagtgtgtctggtctgactctcaagctgatcaggacctct
gtcggtgagatgctggagactctgtctgatgatgactatgtcaacgtggtctatttcaac
accagggtgaataacacagcgtgttttgaccacctggtccaggccaacgtgaggaataag
aagatcctgaaggatgctgttcagaacatctctgctaaaggcatcaccaactacaccaaa
ggatttgagtttgccttcgaacagctctatgcaactaacgtcaccagagccaactgtaac
aagatcatcatgctgttcactgatggaggagaggagagagcgtcggccatactgcagaaa
tacaacgctgacaagaaggtgcgtatcttcaccttctcagtgggtcaacacaactatgat
aaaggtccagtccagtggatggcctgcgctaataaaggatacttctatgagattccctct
attggagccatacgcatcaacactcaggagtacctggatgtcctgggcagacccatggtt
ctagctgaccagctggccaagcaggtccagtggactaatgtctaccttgatgctctggag
ctaggtctggtcatcacaggaaccctacctgtcttcaacaagaccaagtataaagatgaa
tcgggtttagagattcagaaccagttgatcctaggggtgatggggattgacgtgtcacta
gatgacatcaagaagctcacaccgcgcttcactattggacctaatggatattattttgcc
atcgaccccaatggatatgtactgctacaccccaacctccaacctaagaaccctaaattc
caggagcctgtcactctggacttcctcgatgctgaactggagaacgacatcaaagtccag
attaggagaatgatgatagatggcaacccaggtgaagagaccatagagactctagttaaa
actcaggatgagagatacatcgacagaggagaaaggacgtacacctgggctcaggtcaat
ggaacagactacagcttggccctggtcctgcctacctacagtgaacactacatacaggcc
aaactgggagacaccatcagacaggccatggggcagaaggccatgaacactctgcaggtg
gagatgtttgatgagttgggatacaccttcatcgcccccagggagtactgcaaaggcttg
aaggacaaggacaacagcacccagttcctcctggacttcaaccagttcatagacaggaac
acactggaagagccatgtaatgtgactctggtcagtaggctgctgttggacgctgggttg
actgctgatctggtcaaactgtggaaggagcagacattgggtgggattctggccaggttt
gtagccactgatggagggatcaccagagtctatcccagaagtgctggagaggagtggaca
gagaatgctgagacatatgactcaagtttctacaagaggactctggataacagcatctat
attttcaccgctccatacttcaacaagagcagggaatcaggttatgagtcaggtattctg
gtgagcaaggctgtagacctcaacatagatggagtcaacctcaaaccagctgtggtgggg
gtgaaactgaacgtctctgcctggatgaacagcttcatgaatgccaccatcaaagtcaac
tgcaaggatgaaatctgtggctgtctgaagaatgataagcacgttgactgtgtcatcctg
gatgatggcggcttcctgctgatgtccaatcaggatgagtatatcactcagattggtcag
ttctttggggaggtagacccagtggtgatgatcagtctggtcaacacgtctctgtactcc
ttctacaagacttacgactaccagtcagtctgcgatcctgagagagacagcaaggctgct
gcagggccacggtctgtctatgtgcccactatagcagacatgctgagtataggttggtgg
gcctccactgctgcctggtcgataatacagcagctcttctacggtctcatattccccagc
ttcctagaggcagcggactcagatgatgacatgtcagctaacatgtttaaggagagctgt
atcacagagcagactcagtacttctttgacaacgaagagagatcctactcgggagtcctt
gactgtggaaactgctccaggatgtatcgagctgagaagctgcccaacactaacctggtg
tttctgatcactgatgccaaggccacctgtctgtcttgtgaccccagaccgctaagacaa
gctgagcaaccctcccaaggtccagacccatgtgagctggctcagaaccccagatacagg
aaaggacctgatgtgtgtttcgacaacaacatagacgacgagcccctgtgtccaatcagc
ggtgtctctggtctgagtcctgtccccctcctcctgttgctgcaggttttgatgctgggc
cctgggaggatgattctgactgtgggggtgggacctctctaa
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