Salmo trutta (river trout): 115198024
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Entry
115198024 CDS
T08542
Name
(RefSeq) F-box/WD repeat-containing protein 7-like isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115198024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115198024
04121 Ubiquitin system [BR:
stru04121
]
115198024
Membrane trafficking [BR:
stru04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
115198024
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115198024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
F-box
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_LRRK2
PQQ_2
Beta-prop_RIG_1st
eIF2A
Nop14
Motif
Other DBs
NCBI-GeneID:
115198024
NCBI-ProteinID:
XP_029615533
LinkDB
All DBs
Position
8:1103883..1131953
Genome browser
AA seq
739 aa
AA seq
DB search
MKQDMLTRGGNTGTPLPGRRDSMGVSLLGSTPSSSTLSSSSNSSISSISSSSSGEERRKG
GGEEFIGREEEEGEVVSISIVTIAEESCPSEPFGTVGGHVEVTANESAARERDGQSKTSH
STQTEEEGVRNGEEGRKEDDEKEQGDEGEEEEEAEEMGEDESDRSALLEEETDEEGRNQV
FVSDENPETPSALLNIKMKRKLDHGPDIRPFPSGKKHCKGSTYLSPSSFVPFQTTPTTFG
DLRAANGHSAQRRRVTSGPPPSGLQDWLHTFQAWSGPERLLALDELIDSCESNQVKHMMQ
VIEPQFQRDFISLLPKELALYVLTFLEPRDLMQAAQTCSYWRILAEDNLLWREKCREEGI
EEPLVVKRRKTLKPGFLHSPWKSAYVQQHKIESNWRTGDITSPKVLKGHDDHVITCLQFC
GDLIVSGSDDNTLKVWSALTSKCLRTLVGHTGGVWSSQMSGNIVISGSTDRTLKVWDAET
GDCLHTLYGHTSTVRCIHLHDKQVVSGSRDATLRLWDVDSGECLHVLTGHVAAVRCVQYD
GRRVVSGGYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGAYVVSGSLDTSIRVWDVVT
GGCVHTLTGHQSLTSGMELKNNILVSGNADSTVRVWDIRTGQCLHTLQGPHKHQSAVTCL
QFSRSLVVSSSDDGTVKLWSLATGEWIRDLVALQSGGSGGVVWRIRASNTRLVAAVGSRN
GTEETKLMVLDFDLTDNHK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggacatgttgaccagagggggtaacacgggtacacccctgccagggaggaga
gactctatgggggtatcgctgctaggcagcaccccctcctcctccaccctctcttcctcc
tccaactcttcaatctcctccatctcttcatcttcctctggggaagaaaggagaaaggga
ggcggtgaggagtttattggcagagaggaggaagagggggaggtggtcagcatttccata
gttaccatagcggaggagtcctgcccctcggaaccgttcggaactgtcggcggtcacgtc
gaggtaacagcaaatgagagcgcggctagggaaagagatggccaatcaaaaacctcccat
agtacccagactgaagaagagggggtgcggaatggagaggaaggtagaaaggaggatgat
gagaaggagcagggagatgaaggtgaggaggaggaggaggcagaagagatgggtgaagac
gagagtgaccgttctgccttgttagaagaggagacggatgaagagggaaggaaccaggtg
tttgtctcggatgagaaccctgaaacaccttccgcactgctcaacatcaagatgaagagg
aagttggaccatggaccagacatcaggcctttcccttcaggcaagaaacactgcaaaggt
tccacctacctcagtccctccagtttcgtcccgttccagaccacgcccactacctttggg
gacctgcgagcagccaatgggcattcagctcagcggagacgtgtgacttcaggcccgcct
ccctccggcctacaggactggctgcacaccttccaggcgtggagtggtcctgagcgtcta
ttggctctggatgagttgattgacagctgtgagtccaatcaggtgaagcacatgatgcag
gttattgagcctcagttccaacgagacttcatctccctgctgcccaaagagttggccctg
tatgtcctgacgttcttggagcccagagatctgatgcaggctgctcagacctgttcctat
tggaggatactggctgaggacaacctgctgtggagggagaagtgtagagaggagggtata
gaagagcccctggttgtgaagagaagaaagactctaaaacctgggttcctccactcaccc
tggaagagtgcctacgtacaacaacacaagatagagagcaactggaggactggagatatc
acctcacctaaggtcctaaaaggtcatgatgatcatgtgatcacatgtctacagttctgc
ggcgacctcatcgtcagtggatctgacgacaacactctcaaagtctggtccgccctcacc
agcaagtgtctgcgtacattagtaggccatacaggaggtgtgtggtccagtcagatgagc
ggtaacatagtgatcagtgggtcgactgacaggactctgaaggtttgggacgcagagact
ggagactgtcttcacaccctgtatggacacacctctactgtacgctgtatacacctgcat
gacaagcaggttgtgagcggtagccgcgatgctacactgcgtctgtgggacgtagattct
ggcgagtgtctccacgtcctgacgggccatgtggcggcggtgcgctgcgtccagtatgac
gggcgcagggtggtcagcggagggtacgacttcatggttaaagtctgggaccctgagaca
gagacctgtctacacactctgcagggacacactaacagagtctattcactacagtttgac
ggtgcctacgtggtcagtggatctctggacacctccatccgagtatgggacgtagtgacg
ggagggtgcgtccacaccctgaccggccaccaatcgctgaccagcggtatggaactaaag
aacaacatcctggtctctggcaacgctgactctactgtcagggtctgggatatacgaaca
ggacagtgtctccacacactgcaaggtccccataagcaccagtcggcagtaacctgtctc
cagttctctcgctccctggtggtctcttcatcagatgacgggacagtgaagctgtggagc
ctggcgacgggggagtggatcagagacctggtggcgctgcagagtgggggatcgggagga
gtggtgtggaggatcagagcgtccaacaccagactggtagcagcagtcggcagcaggaac
gggacagaggagactaaactcatggtgctggattttgacctcactgacaaccacaagtga
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