Salmo trutta (river trout): 115198390
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Entry
115198390 CDS
T08542
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00514
Other types of O-glycan biosynthesis
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115198390 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115198390 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
stru01003
]
115198390 (lfng)
Enzymes [BR:
stru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115198390 (lfng)
Glycosyltransferases [BR:
stru01003
]
Glycan extension
O-Glycan
115198390 (lfng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
115198390
NCBI-ProteinID:
XP_029616156
UniProt:
A0A674A807
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All DBs
Position
1:49357224..49365218
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AA seq
379 aa
AA seq
DB search
MSKSYGKKTVISITSAGFTCLLLLLVVAQHQRVQVDEVPNQREMGTRSLQSMDTLATDGV
KAVQQQVNSEAQAKKGFSAYFSKLTRGRREADKPAGSAQSATDASPAEDISADDIFIAVK
TTKKFHQSRLNLLLDTWISRNMQQTYIFTDGEDEELKKKMGSHAINTNCSAAHSRQALSC
KMAVEYDKFIESGKKWFCHVDDDNYVNMRTLVKLLSHYPHTQDMYIGKPSLDRPIEATER
LGDKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESV
LGVPLTRSNFFHSHLENLQQVSRSELHKQITLSYGMFENKRNIINMKGAFPVEEDPSRFK
SVHCLLYPDTPWCPLQVAY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagttatggtaagaaaacggttatctctataaccagtgcaggattcacctgc
cttctgttgctcttggtggtcgcgcagcatcaaagagttcaggtagacgaggttccaaac
cagagagagatggggacgcgctcactccagagcatggacaccttggctacggacggagtg
aaggctgttcagcaacaggtcaactctgaggcgcaggcaaaaaaaggattctctgcgtat
ttttccaagttgacccggggacggcgagaggcggacaagcctgcggggtccgctcagtca
gcgacagatgcctcccccgcagaggacatcagtgcagatgacatcttcatcgctgtcaag
accacaaagaagttccatcagtctcgactgaatctccttctggatacctggatctctaga
aacatgcagcagacctacatcttcacagacggagaagatgaggagctgaagaagaaaatg
gggagtcacgccatcaacaccaactgttcagcagcacacagccgccaagctctatcctgc
aagatggctgtggagtacgacaagttcattgagtctgggaaaaagtggttttgtcacgtg
gatgatgataactacgttaacatgaggactctggtgaagctgctgtcccactacccccac
acccaggacatgtacattggcaagcccagcctggaccggcccattgaggccacagagagg
ctaggagacaagatgagaccagtaaacttctggtttgctactgggggagctggcttctgt
gtgagccgaggcctggctttgaagatgagcccatgggccagtggcggccattttatgaac
acggcagagaagattcgtctgcctgacgactgcaccatcggctacatcatcgagtcggtg
ctgggggtgcctctgacccgcagcaacttcttccactcccatctggagaacctccaacag
gtgtccagatctgaacttcacaaacagatcacattgagttatggaatgtttgagaataag
aggaacatcatcaatatgaaaggggctttcccagtggaggaagacccatcaaggtttaag
tctgtgcactgtttgctgtacccagacaccccttggtgcccgcttcaggttgcctactag
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