KEGG   Salmo trutta (river trout): 115199073
Entry
115199073         CDS       T08542                                 
Name
(RefSeq) apoptotic protease-activating factor 1-like isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
stru  Salmo trutta (river trout)
Pathway
stru04115  p53 signaling pathway
stru04210  Apoptosis
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    115199073
   04115 p53 signaling pathway
    115199073
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115199073
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz APAF1_C Beta-prop_EML_2 NB-ARC Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 APAF-1-like_WHD Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st CARD NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st RMC1_N Beta-prop_EIPR1 PEP5_VPS11_N eIF2A WD40_like Beta-prop_HPS5 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_WDR75_2nd CARD_2 Beta-prop_SPT8 AAA_16 Beta-prop_WDR11_2nd NACHT nSTAND1 AAA_22
Other DBs
NCBI-GeneID: 115199073
NCBI-ProteinID: XP_029617477
Ensembl: ENSSTUG00000018437
UniProt: A0A673ZI81
LinkDB
Position
8:complement(44631603..44704124)
AA seq 1265 aa
MAMMEEGARSCLLQSRSSLEQDIRASYLMDHMISDGVLTGDEEDRIRSKSTRREQAAALL
ELLLRKDNQAYISFYNALVRESYGDLASLLHNSLPLVSPEAEKSFSDGGTRYVQAVLSEG
GVPQRPVVFVSRPALVNRVREKLYRLQKEPGWVTVFGMAGSGKSVLAAEAVRDHALITEC
FPGGVHWLSIGQLDRADLLVRIQSLCFRLEQQSQEKDPSSSLHRPPGSLEEAKERLRFLM
LRRYPRSLLILDDIWDSSVLRAFDIQCRVMLTTRDRSLADCVSGFKSEVAVESGLEEDQA
LEILALYVNGKPQRLPEQARSIVRECKGSPLVVSLIGALLREFPDRWAYYLHTLQQKKFK
RIRKSSSYDYDALDQAMAASIQVLSEEHRELYIDLTVLEKDVKVPAKVLSVLWDLEPEEV
EDVLQDFVNKSLLFRDCHHRPYLYYLHDLQLDFLAEMNRSGLESLHTKVVRQYQQRYSQG
PPTSGDEECLYWFRFLTYHMAKANLTQELYSLMFSLDWVRTKAQIMGPAHLINDYVEYGA
ILDKENSEVRGHFQEFLSLNGHQLEQRPFPDVVQLALSQPDSSEVYRQALLQAQERATRG
GLYLDWVNKSSLKSLSRLVVQPHQGSIYAACFSHDGTKIASCGSSKTLRVFKSTSGEKLL
EIQAHDDEVLCCAFSPDDRLLATCSSDRKVKVWNVERGTLMRMFEEEHEEQVNHCQFTNT
RRRLLLATCSNDKFMNTKLWNINKPSSQNTMFGHLEPVNHCCFSPDDAYLSTSSSDGTLK
LWEVSSANEWKSIDVADMFPEQREQTAVMVKCSTWSADGRTIICAARNAVFVFDVETAAM
LLEIRTSRLSTVQYCHSCPSSNLVAIALSHYAVELWDIETSKKMADCSGHLSWVHGVQFS
PDGSLLLSCSDDQTVRVWETNRVHTSSAVCLKRDSDVLFNNGDITVVAADNRNRLQVRNG
RTGAVMFQSEDQESRIRCTAICSQTSAVGLGREDGTIQVLEVPSGTSLATLQGHTRTVLH
CQFTPEGHTLITSSEDTTIRVWRWRTGECVVLEGHKEQVRCFSLLTTSPSETHLLSWSFD
GTIKVWDMSSGERLQDLVCHQGAVLACDVSPDGQLFATTSADKTAKVWTSASWECVRLLN
GHQDCVRSCKFSWDGRRLATGDDNGEIRLWNMKDGTLLKICSSDNKDAMDSLHGGWVTDL
HFSPDNTVLLSTGGYIKWWNVEKGEALQTFYPTGANLKRIHVSPDFSTFVTIDNIGILYV
LKKVE
NT seq 3798 nt   +upstreamnt  +downstreamnt
atggcgatgatggaggaaggggcgcggagctgcctgcttcagtcacgctccagcctggag
caggacatcagggcttcctacctgatggatcacatgatcagtgacggcgtgctgacaggg
gacgaggaggacaggatcaggagcaagtccaccaggagagagcaggcggcggccctgctg
gagctgctcctgaggaaggataaccaggcctacatctccttctacaacgccctggtccgt
gagagctatggagacctggccagcctgctccacaacagcctgcccctggtctcccctgag
gctgagaagagcttctcagatgggggaacccgctatgtccaggcggtgctgagtgagggc
ggcgtgccccagagacccgtggtgtttgtgagccggccagccctggtgaaccgggtcagg
gagaagctctaccgcttgcagaaggagcccggctgggtcactgtgttcggcatggccggc
tccggcaagtctgtcctggctgcggaggcagtccgagaccacgcactcatcacagagtgt
tttccaggaggagtccactggctgtccataggccagctggaccgggctgacctactggtt
aggatccagtcactgtgtttccgcctggagcagcagagccaggagaaagacccctcgtcc
tcccttcaccggcctcctggctctctggaggaggccaaggagcgactacgcttcctcatg
ctccgtcgttaccccaggtcgttgctgatactggatgacatctgggacagctcggtgctc
agggcctttgacatccagtgtcgagttatgctcaccacccgagacagaagcctagccgac
tgtgtcagtggttttaagtctgaggtggcagtggagagtggtctggaggaggatcaggcc
ttggagatcctcgccctgtatgtcaacgggaaaccccagagactcccagaacaggcccgc
agcattgtccgagagtgcaaaggctcccccttggtggtgtccctaatcggggccctgctg
cgggagttcccggaccgctgggcctactacctgcacacgctccagcagaagaagttcaag
cgtattcgtaagtcgtcttcgtatgactacgatgcccttgaccaggccatggctgccagc
atccaggtcctgtctgaggaacacagggagctgtacattgacctcaccgtgctggagaag
gacgtcaaagtacctgccaaggttctgtcggttctgtgggatctagaaccagaggaggta
gaggacgttcttcaggactttgtgaacaagtccctactgttccgtgactgtcaccaccgg
ccctacctctactacctccacgacctccagctggacttcctggctgagatgaaccgctct
ggtctagagagcctccacaccaaggtggtgcgtcagtaccagcagcgctacagccagggt
ccccccacctcaggagatgaagagtgcctctactggttcagattcctcacctaccacatg
gccaaggccaacctcacacaggagttgtactctctgatgttctctctggactgggtcaga
actaaagctcagattatgggaccggctcatctcatcaatgactatgtggagtacggcgcc
atactggacaaagagaacagcgaggtgcggggccacttccaggagttcctgtctctgaac
ggccaccagttggagcagcgtccgttccctgacgtagtgcagctggccctgtcccagcca
gactcctctgaggtgtaccgccaggccctgctgcaggcgcaggagagggccaccagaggg
ggactctaccttgactgggtgaacaaaagtagtctgaagagcctgtctcgtctggtggtc
cagccccaccagggatccatctacgctgcctgcttctcccacgacggcaccaagatcgcc
tcctgtggctccagcaagacactgcgagtgtttaagagcacctctggggagaagctgctg
gagatccaagcccacgacgatgaggtgctctgctgcgccttctcccctgatgaccgtctc
ctagcaacctgctccagtgataggaaggtcaaggtttggaacgtggagcgtgggactctg
atgaggatgtttgaggaggaacacgaggagcaggtcaaccactgtcagttcaccaacaca
cgccgacgcctcctactggccacctgttccaacgacaagttcatgaacaccaagctgtgg
aacatcaataaaccctcctcccagaacaccatgtttggtcatttggagcctgtcaatcac
tgctgtttctcccctgatgacgcctacctctccacctcttccagcgacggaaccctgaag
ctgtgggaggtgtcctcggccaatgagtggaagtccatagacgtggcggacatgttcccg
gagcagagagagcagactgcggtcatggtgaagtgcagcacctggtcagcagacggcagg
accatcatctgtgctgccaggaacgcagtctttgtgtttgatgtagagacggcggccatg
ttgttggagatccggaccagtcgtctgagcacggtgcagtactgtcactcctgtcccagc
agcaacctggtggccatcgcactgtcacactatgctgtggagctgtgggacatagagacc
agtaagaagatggctgactgtagtggtcatctgagctgggtccatggagtccagttctcc
cctgacggatctctactgctctcctgttctgacgaccagaccgtcagggtgtgggagacc
aatagagtccacacctcctcggctgtctgtctgaagagggactctgacgtgctctttaac
aatggtgacattaccgtggtcgccgccgacaaccgcaacagactgcaggtgaggaatggg
aggaccggagcggtgatgttccagtcagaggaccaggagtctcgtatccgctgcactgct
atctgctcacagacctcagccgtggggctgggacgagaggatgggacgatacaggtgttg
gaggtgccgtcggggacctctctagccactcttcagggtcacaccaggacagttctccac
tgccagttcaccccggagggacacacactcatcacctcctctgaggacaccaccatacgg
gtgtggaggtggaggacaggtgagtgtgtggttctggagggccacaaggagcaggtcaga
tgcttctctctgctcaccacctcaccctcagagacacatctcctcagctggtcctttgac
ggcaccatcaaggtgtgggacatgtctagtggtgaacggctgcaggacctagtgtgtcac
cagggggcggtgctagcctgtgacgtgtcgcctgacggacagctctttgccaccacctcc
gctgacaagactgctaaggtgtggaccagtgcatcgtgggagtgcgtgcgcctgttaaat
ggccaccaggactgtgtccgcagctgcaaattctcttgggacggccggcgcctagcaacc
ggcgacgacaacggagagatacggctgtggaacatgaaggatggtactctgctaaagatc
tgttccagtgacaacaaggacgccatggactctctgcacggaggctgggtgaccgacctg
cacttctccccagacaacactgtgctgctgtctacaggaggatacattaagtggtggaac
gtggagaaaggagaggccctccagacgttctacccgacaggagccaatctgaaaaggatc
cacgtgtcacctgacttttccaccttcgtcaccatcgacaatatcggaatcctctacgtc
ctgaagaaggtggaatga

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