Salmo trutta (river trout): 115199956
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Entry
115199956 CDS
T08542
Name
(RefSeq) RING-box protein 1 isoform X1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03420
Nucleotide excision repair
stru04110
Cell cycle
stru04114
Oocyte meiosis
stru04120
Ubiquitin mediated proteolysis
stru04141
Protein processing in endoplasmic reticulum
stru04310
Wnt signaling pathway
stru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115199956
04120 Ubiquitin mediated proteolysis
115199956
09124 Replication and repair
03420 Nucleotide excision repair
115199956
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115199956
04350 TGF-beta signaling pathway
115199956
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115199956
04114 Oocyte meiosis
115199956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115199956
03400 DNA repair and recombination proteins [BR:
stru03400
]
115199956
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
115199956
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
115199956
Multi subunit type E3
SCF complex
Ring finger protein
115199956
Cul2 complex
115199956
Cul3 complex
115199956
Cul4 complex
115199956
Cul7 complex
115199956
Cul8 complex
115199956
Cul9 complex
115199956
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
115199956
TCR (transcription coupled repair) factors
Cul4-CSA complex
115199956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
115199956
NCBI-ProteinID:
XP_029618399
Ensembl:
ENSSTUG00000026239
LinkDB
All DBs
Position
1:complement(53325487..53329389)
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagtaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaaaaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag
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integrated database retrieval system