KEGG   Salmo trutta (river trout): 115199956
Entry
115199956         CDS       T08542                                 
Name
(RefSeq) RING-box protein 1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03420  Nucleotide excision repair
stru04110  Cell cycle
stru04114  Oocyte meiosis
stru04120  Ubiquitin mediated proteolysis
stru04141  Protein processing in endoplasmic reticulum
stru04310  Wnt signaling pathway
stru04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115199956
   04120 Ubiquitin mediated proteolysis
    115199956
  09124 Replication and repair
   03420 Nucleotide excision repair
    115199956
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    115199956
   04350 TGF-beta signaling pathway
    115199956
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    115199956
   04114 Oocyte meiosis
    115199956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stru04121]
    115199956
   03400 DNA repair and recombination proteins [BR:stru03400]
    115199956
Enzymes [BR:stru01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     115199956
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   115199956
  Multi subunit type E3
   SCF complex
    Ring finger protein
     115199956
   Cul2 complex
     115199956
   Cul3 complex
     115199956
   Cul4 complex
     115199956
   Cul7 complex
     115199956
   Cul8 complex
     115199956
   Cul9 complex
     115199956
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      115199956
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115199956
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 115199956
NCBI-ProteinID: XP_029618399
Ensembl: ENSSTUG00000026239
LinkDB
Position
1:complement(53325487..53329389)
AA seq 108 aa
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagtaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaaaaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag

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