Salmo trutta (river trout): 115202162
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Entry
115202162 CDS
T08542
Name
(RefSeq) GTP-binding nuclear protein Ran-like isoform X1
KO
K07936
GTP-binding nuclear protein Ran
Organism
stru
Salmo trutta (river trout)
Pathway
stru03008
Ribosome biogenesis in eukaryotes
stru03013
Nucleocytoplasmic transport
stru03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115202162
03008 Ribosome biogenesis in eukaryotes
115202162
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115202162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115202162
03009 Ribosome biogenesis [BR:
stru03009
]
115202162
03016 Transfer RNA biogenesis [BR:
stru03016
]
115202162
03036 Chromosome and associated proteins [BR:
stru03036
]
115202162
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115202162
04031 GTP-binding proteins [BR:
stru04031
]
115202162
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115202162
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
115202162
Pre-60S particles
115202162
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115202162
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
115202162
Spindle formation proteins
115202162
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115202162
GTP-binding proteins [BR:
stru04031
]
Small (monomeric) G-proteins
Ran Family
Ran
115202162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
G-alpha
RNA_helicase
Gtr1_RagA
ArgoMid
AAA_24
AAA_33
TsaE
Pox_A32
Septin
AAA_22
AAA_7
Motif
Other DBs
NCBI-GeneID:
115202162
NCBI-ProteinID:
XP_029621953
Ensembl:
ENSSTUG00000035278
LinkDB
All DBs
Position
11:6548395..6560791
Genome browser
AA seq
237 aa
AA seq
DB search
MTDPPPPNRSRSRAYSHQHIEQTAMAEPDVQFKLVLCGDGGTGKTTFVKRHLTGEFEKKY
VATLGVEVHPLVFHTTRGTIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYK
NVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEK
PFLWLARKLVGDPNLEFVEMPALAPPEVVMDASLAAQYENDLKVAAETALPDEDDDL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccctccacctccaaatcgatcccgctccagagcgtatagtcaccaacacata
gaacagaccgctatggcagaaccagatgtacaatttaagctagtgttgtgtggagatgga
ggcacaggaaaaaccaccttcgtgaagaggcatttaacgggagagtttgagaagaaatac
gttgccactctgggagtagaggtgcaccccttggtcttccacaccactcgagggaccatc
aagtacaacgtctgggacacagccggccaggagaagtttggggggctcagagatggctac
tacatacaggcccagtgtgcgatcatcatgttcgacgtgacatctcgcgtcacctacaag
aacgtgcccaactggcaccgtgacctggtgcgcgtctgcgagaacatacccatagtcctg
tgcggcaacaaggtggacatcaaggacaggaaggtcaaagccaagagcatcgtgttccac
cgcaagaagaaccttcagtactacgacatctcagccaagagtaactacaactttgagaag
cccttcctgtggctggccaggaagctggtaggagaccccaacttggagtttgtggagatg
cctgccctcgcccccccggaggtcgtcatggatgcctccctggccgcgcagtacgagaac
gaccttaaagttgccgcagaaacagcgctcccagatgaagacgatgacctttaa
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