KEGG   Salmo trutta (river trout): 115202162
Entry
115202162         CDS       T08542                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-like isoform X1
  KO
K07936  GTP-binding nuclear protein Ran
Organism
stru  Salmo trutta (river trout)
Pathway
stru03008  Ribosome biogenesis in eukaryotes
stru03013  Nucleocytoplasmic transport
stru03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115202162
   03008 Ribosome biogenesis in eukaryotes
    115202162
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115202162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115202162
   03009 Ribosome biogenesis [BR:stru03009]
    115202162
   03016 Transfer RNA biogenesis [BR:stru03016]
    115202162
   03036 Chromosome and associated proteins [BR:stru03036]
    115202162
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115202162
   04031 GTP-binding proteins [BR:stru04031]
    115202162
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     115202162
Ribosome biogenesis [BR:stru03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    115202162
  Pre-60S particles
    115202162
Transfer RNA biogenesis [BR:stru03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    115202162
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     115202162
   Spindle formation proteins
    115202162
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115202162
GTP-binding proteins [BR:stru04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    115202162
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU G-alpha RNA_helicase Gtr1_RagA ArgoMid AAA_24 AAA_33 TsaE Pox_A32 Septin AAA_22 AAA_7
Other DBs
NCBI-GeneID: 115202162
NCBI-ProteinID: XP_029621953
Ensembl: ENSSTUG00000035278
LinkDB
Position
11:6548395..6560791
AA seq 237 aa
MTDPPPPNRSRSRAYSHQHIEQTAMAEPDVQFKLVLCGDGGTGKTTFVKRHLTGEFEKKY
VATLGVEVHPLVFHTTRGTIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYK
NVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEK
PFLWLARKLVGDPNLEFVEMPALAPPEVVMDASLAAQYENDLKVAAETALPDEDDDL
NT seq 714 nt   +upstreamnt  +downstreamnt
atgacagaccctccacctccaaatcgatcccgctccagagcgtatagtcaccaacacata
gaacagaccgctatggcagaaccagatgtacaatttaagctagtgttgtgtggagatgga
ggcacaggaaaaaccaccttcgtgaagaggcatttaacgggagagtttgagaagaaatac
gttgccactctgggagtagaggtgcaccccttggtcttccacaccactcgagggaccatc
aagtacaacgtctgggacacagccggccaggagaagtttggggggctcagagatggctac
tacatacaggcccagtgtgcgatcatcatgttcgacgtgacatctcgcgtcacctacaag
aacgtgcccaactggcaccgtgacctggtgcgcgtctgcgagaacatacccatagtcctg
tgcggcaacaaggtggacatcaaggacaggaaggtcaaagccaagagcatcgtgttccac
cgcaagaagaaccttcagtactacgacatctcagccaagagtaactacaactttgagaag
cccttcctgtggctggccaggaagctggtaggagaccccaacttggagtttgtggagatg
cctgccctcgcccccccggaggtcgtcatggatgcctccctggccgcgcagtacgagaac
gaccttaaagttgccgcagaaacagcgctcccagatgaagacgatgacctttaa

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