Salmo trutta (river trout): 115202857
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Entry
115202857 CDS
T08542
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru03320
PPAR signaling pathway
stru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115202857
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115202857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115202857
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115202857
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115202857
Nuclear receptors [BR:
stru03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
115202857
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Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
115202857
NCBI-ProteinID:
XP_029622798
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All DBs
Position
12:8051027..8089125
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AA seq
478 aa
AA seq
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MSTLSGTDITDVGHGEVFDGAPELQLDCLCSGDDHSSAEMKHEGNLLPLEPPRHAGFSSP
PQKGPSSLAEKNSPLLMEPSNIKADPAGDMPANTEGQPVKRKKGPAPKMLGNEVCSVCGD
KASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAGM
LEQCVLSEEQIRVKKMKKNEEETARTSAVVTPTPVPEVVPLAPEQLEMIEKLVAMQKQCN
KRSFIDRPKVTPWPQSQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTRED
QIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYNKEDFAKAGLQLEFINPIFEFSKG
MNDLHLDEAEYALLIAINIFSAGQRSSGMLVWNIAHMQDRPNVQDHELVERLQQPYVDAL
RSYIMIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccacactgtctgggactgatatcacagatgttggccatggtgaggtgttcgacggg
gccccagagctgcaactggactgtctctgcagtggtgacgaccacagtagtgcagaaatg
aagcatgagggaaacctcctccccctggaaccaccccgccatgcagggttttccagcccc
ccccagaaagggccttcctcattagctgagaagaatagcccgctgctcatggagcccagc
aacatcaaggccgaccccgccggcgacatgcctgccaacacagagggtcagccggtgaag
aggaagaagggtccagcccccaagatgctggggaacgaggtgtgcagcgtgtgcggggac
aaggcctcgggcttccactacaacgtgctgagctgcgagggctgcaagggcttcttccgc
cgcagcgtcatcaagagcgcccagtactcatgcaagaacaatggccgctgtgagatggac
atgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgcgaggcgggcatg
ctggagcaatgcgttctctcagaggagcagatccgagtgaagaaaatgaagaagaacgag
gaagagactgcacgcacatctgccgtggtgacccccaccccggtgccggaggtggtcccg
ctggcgcccgagcagctggagatgatcgagaagctggtggccatgcagaagcagtgcaac
aagcgctcgttcatcgaccggcccaaagtcacgccgtggccccagagtcaggacccccag
aacagggaggtgcggcagcagcgctttgcccacttcaccgagctggccatcatgtcggtc
caggagatagtggactttgccaagcagttgcctggcttcctagagctcaccagagaggac
cagattgccctgctgaagacctcaaccattgagatcatgctgctggaaacatcgcggaga
tataaccctgccattgagagcatcacgttcctgaaggacttcagttataacaaggaggat
tttgccaaagcagggctgcagttggagtttattaaccccatctttgagttctccaagggc
atgaacgacctgcacctggacgaggcggagtacgctctgctcattgccatcaacatcttc
tctgcaggtcagaggtcaagtggtatgctagtgtggaacatagcccatatgcaagaccgg
cccaatgtgcaggaccatgaacttgtggagcgactgcagcagccgtacgtggacgcactt
cgttcttacatcatgatcaagagaccaaacgatcacctgatgtttccacgcatgctcatg
aagctggtcagcctccgcaccctcagcagcgtccactctgagcaggtcttcgccctacgc
ctccaggacaagaagctcccgccgctgttatctgaaatctgggacgtccacgagtga
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