KEGG   Salmo trutta (river trout): 115204052
Entry
115204052         CDS       T08542                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
stru  Salmo trutta (river trout)
Pathway
stru04010  MAPK signaling pathway
stru04137  Mitophagy - animal
stru04141  Protein processing in endoplasmic reticulum
stru04210  Apoptosis
stru04217  Necroptosis
stru04621  NOD-like receptor signaling pathway
stru04622  RIG-I-like receptor signaling pathway
stru04920  Adipocytokine signaling pathway
stru05132  Salmonella infection
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115204052
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    115204052
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    115204052
  09143 Cell growth and death
   04210 Apoptosis
    115204052
   04217 Necroptosis
    115204052
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    115204052
   04622 RIG-I-like receptor signaling pathway
    115204052
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    115204052
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115204052
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115204052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115204052
   04121 Ubiquitin system [BR:stru04121]
    115204052
Enzymes [BR:stru01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115204052
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     115204052
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    115204052
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_4 zf-RING_5 zf-RING_4 zf-C3HC4_2 zf-RING_6
Other DBs
NCBI-GeneID: 115204052
NCBI-ProteinID: XP_029625160
Ensembl: ENSSTUG00000040994
UniProt: A0A674DAZ4
LinkDB
Position
12:complement(68384050..68403479)
AA seq 526 aa
MARISLPSLDSSLPGIPQSVLAVSMEAKYQCQQCHQVLRKPVQAQCGHRFCVHCFKLLTS
SGPKPCEACRQEEIYEEPQSILNSNEAFPDNAAGREIASLPAKCISEGCSWTGCIKEYEA
QHEGKCEYERVPCETCQVLILRSEKERHNERECEARTLNCKYCKVSFNFKEIKAHDEICQ
KFPMQCKDCGKKKIPREKFLDHSRSCAKSKTACPFSEVGCKVVIDNGKHSDHEQTSVMEH
MRLILATMSLVRLQRPEAPGLGEWQEDSGLGLYRAPEDGATATAATDGGGAAASGQTFGL
DHKVRALENIVCVLNREVERSSLTLEAFSRQHRLDQDKIENLGNKVRQLERTLTMRDLQL
AETDQTLRELQFCTFDGVFVWKIADFSRRRQDAVAGRTPAMFSPAFYSSKYGYKMCLRLY
LNGDGTGRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVSSTS
FQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVDLTGL
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggcccgcatatctctaccctctttggactcctcccttccagggataccccagagtgtg
ctggctgtttccatggaagctaagtaccaatgccagcagtgtcaccaggtcctgaggaag
ccagtccaggctcagtgtggacatcgtttctgtgtccattgtttcaaactgctcaccagc
tccggcccaaagccctgtgaagcctgtcgacaggaggagatttatgaggagccacagtcc
attctcaatagtaacgaggcttttccagacaatgcagctggtagagaaatcgccagcctg
cctgccaaatgtatcagtgagggatgctcttggactggttgcataaaagaatatgaggca
caacacgagggcaagtgtgagtatgagcgagtaccatgtgaaacctgccaggtccttatc
ctgcgcagtgaaaaagagaggcataatgagagagaatgtgaagcaaggacattgaactgc
aagtactgcaaagtctccttcaacttcaaggaaatcaaggctcatgatgaaatctgccag
aagtttcccatgcagtgcaaggactgtggaaagaaaaagatcccacgggaaaagtttcta
gatcacagcagatcctgtgccaagtctaagactgcatgtccgttcagtgaggtcggctgc
aaggttgtgattgataatgggaagcacagtgaccacgagcagactagtgtcatggagcac
atgcgtctgatcctggcgactatgtctctggtgcggcttcagcgtccagaggccccaggg
ctgggggagtggcaggaggactctgggctgggcctgtaccgcgctcccgaggatggagcc
acagctactgcagccacagatgggggaggagccgctgcctctggacagacatttggtctt
gaccacaaggtgagagcactggagaatatagtgtgtgtactgaacagggaagtggaaagg
agttctctcactttagaggccttctcacggcaacatcgtctagaccaagacaagattgag
aacctcggcaacaaggtacgtcaactagagcgtactctcaccatgcgggacctacaactg
gctgagacagaccagactctgcgagaactccagttttgcacctttgatggtgtctttgtc
tggaagatcgctgacttctcacgccgccgccaggacgctgtggccgggcgaacacccgct
atgttctcaccagcattctactcaagtaaatatggctataagatgtgtctgagactgtat
ctgaatggggacggaacgggtcgagggactcacctttctctcttcttcgtggtgatgagg
ggcaagtgtgacgctcttctcaaatggccattcagtcagaaggtgacactgatgctgctg
gatcagaataacagggagcatatcattgatgccttccggcctgatgtaagctccacctct
ttccagcgaccaatcagtgagatgaacatagccagtggctgcccactcttctgcccattg
gctaaactggcaggcaagagctcctaccttagggatgacaccattttcatcaaggccatt
gtagacctcacaggcctgtag

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