Salmo trutta (river trout): 115205082
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Entry
115205082 CDS
T08542
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115205082
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115205082
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
115205082
NCBI-ProteinID:
XP_029626533
Ensembl:
ENSSTUG00000004389
LinkDB
All DBs
Position
13:3719574..3808989
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AA seq
901 aa
AA seq
DB search
MLTKARMYHKRVSFFEEEDEQCWIEENDGVNAHDLMSVQKVRNSSGYCAYNMKGAAELEL
PAHRRMTGAREKGRRPATRGPAFMFNDHTTIMTAEEERFLDAAEYGNIPVVRKMLEESTT
LNVNCVDYMGQNALQLAVGNEHLEVMELLLRRDNLARIGDALLLAISKGYVRIVEAILAH
PSFQASERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLLKGARI
ERPHDYFCKCPECTEKQVKDAFSHSRLRINAYRGLASPAYLSLSSEDPVLTALELSNELT
KLADIEKEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVTAEKEAGKGLRSLLS
RVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAVKCLVVVAVAFGLPLLAMGY
WFAPCSRLGNVLRSPFMKFVAHAASFVIFLCLLLFNASDRFEGISTMPNVTVTDHPMQIY
RVKTTEFSWTEILIMVWVTGMMWSECKELWTEGPREYMQQLWNILDFGMLSIFIAAFTAR
FFAFLQATRAQQYVNEKIHTTDLSLVTLPPEVKYFTYARDKWLPSDPQLISEGLYAIAVV
LSFTRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLGAKV
NPAFTTVEESFKTLFWSIFGLSEVSSVVLKYNHKFIENIGYVLYGIYNVTMVVVLLNMLI
AMINSSYQEIEDDADVEWKFARSKLWLSYFDNGKTLPPPFSIVPTPKSFYHHIKWIVGML
PCRQRNVKKDLELGLDSSKSRLNLFTQSNLRIAESHSILNQPTCYQQIMKRLIKRYVLKA
QVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELSLLIQKLSDKLNLGPTTRLPY
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgaaggccagaatgtatcacaagagagtatcgttcttcgaagaggaggatgaa
cagtgctggatagaggaaaacgacggcgtgaatgcacatgacctaatgtccgtccaaaaa
gtccggaactcgtcgggatattgtgcttataatatgaaaggggcggcggaacttgagctc
cccgcccaccggcggatgacaggggctcgggagaagggtcgtcgaccagcgacgcgtggg
ccggccttcatgttcaacgaccacaccaccattatgaccgccgaggaggagcgctttctg
gatgccgccgagtacggcaacatccctgtggtccgcaagatgctggaggagtccaccacg
ctcaatgtcaactgtgtggactacatgggccagaacgcattgcagcttgcggtcggcaac
gagcatctggaggtgatggaactgctcttgcggagggacaacctggcacgcatcggtgac
gccttactcctggctatctcgaaagggtatgtcaggatcgtggaagccatcttggcccat
ccatccttccaagccagcgagcggctgacgcggagtccgtgtgagctgcaggacgatgac
ttctactcgtatgacgaggatggcacacgcttctcgcccgacatcacccccatcattctg
gctgcacactgccagaagtacgaggtggtacacatgctgctgttgaagggcgcgcgcatt
gagcggccacatgactacttttgcaagtgcccagaatgcaccgagaaacaggtcaaagac
gctttcagccactcacgtttgcgcatcaatgcctaccggggcctggctagcccggcttac
ctttcgctgtctagcgaggacccagtgctcaccgcgctggagctcagcaatgaactgacc
aagttggctgacatcgagaaggagttcaagaatgactaccgcaagctgtctatgcagtgt
aaggactttgtagtgggagtgctggacctctgtcgggacacggaggaagtggaagccatt
ttgaatggagatgttactgctgagaaggaggcggggaagggccttcgctctctcctgagc
agggtcaaactggccatcaagtacgaggtgaaaaagtttgtggcccaccccaactgccag
cagcagctgctgacgatctggtatgagaacctgtcgggcctgagggagcagaccatcgct
gtgaagtgcctggtggtggtggcggtggcctttggtttgcccctactggccatgggctac
tggttcgctccctgcagtcggctgggaaatgtcctgcgcagccccttcatgaagtttgtg
gcccatgccgcttccttcgtcatcttcctgtgcctgctgttgttcaacgcatcggaccgc
ttcgagggcattagcaccatgccaaacgtgaccgtcactgaccatcccatgcagatttac
cgggtcaagaccaccgaattcagctggaccgagatactcatcatggtctgggtcacagga
atgatgtggtcggagtgtaaggagctgtggaccgaggggcccagggagtacatgcaacag
ctgtggaacattctggacttcggcatgctctccatcttcattgccgctttcaccgctcgg
ttctttgccttcctccaggccaccagagcccagcagtacgtcaacgaaaagatccacacc
accgacctctccctggtgaccctacccccagaggtcaaatactttacctacgcaagagac
aaatggctgccgtcggacccccagctgatctcagaagggctgtacgccatcgctgtggtg
ctgagcttcacacgcatcgcttacatcctgccggctaatgagagctttggaccgctccag
atctccctgggccgcacggtcaaagacatcttcaagtttatggtcctgttcatcatggtc
ttcctggcgttcatgatcggcatgttcatcctctattcttactacttgggtgccaaggtc
aacccggccttcaccacggtggaggagagcttcaagactctgttctggtctatatttgga
ctgtccgaggtgtcctctgtggtgctcaagtacaaccacaagttcatcgagaacatcggc
tacgtgctctatggaatctacaacgtgaccatggtggtggtgttgctcaacatgctgatt
gccatgatcaacagctcttatcaagaaatcgaggacgatgcggacgtggagtggaagttt
gcacgctccaagctatggctgtcgtactttgacaatggcaagacactgcctcctcccttc
agcatcgttcccactcccaagtccttctaccaccacatcaagtggatagtcggcatgctg
ccatgccgacaacggaatgtgaagaaggatctagagctggggttggacagttcaaagtcc
aggctcaatctcttcacccagtccaacctacgcattgcagagtcccacagcattctgaac
caacccacttgctatcagcaaatcatgaagcgactcatcaaacgctacgttttgaaagca
caagtggacaaagaaaacgatgaggtcaatgaaggtgaactgaaagaaatcaagcaggac
atctccagtttacgttacgaactcctggaagacaagtctcaggctacagaggagctgtcc
ttgcttatccagaaactgagtgacaaactgaacctaggccctactacacgcttgccctac
aagtga
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