Salmo trutta (river trout): 115205128
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Entry
115205128 CDS
T08542
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
stru04140
Autophagy - animal
stru04217
Necroptosis
stru04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115205128 (sqstm1)
04137 Mitophagy - animal
115205128 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
115205128 (sqstm1)
04218 Cellular senescence
115205128 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115205128 (sqstm1)
03029 Mitochondrial biogenesis [BR:
stru03029
]
115205128 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115205128 (sqstm1)
Membrane trafficking [BR:
stru04131
]
Autophagy
Mitophagy
Cargo receptors
115205128 (sqstm1)
Pexophagy
115205128 (sqstm1)
Aggrephagy
115205128 (sqstm1)
Xenophagy
115205128 (sqstm1)
ER-phagy
ER-phagy recepters
115205128 (sqstm1)
Other autophagy associated proteins
Midbophagy
115205128 (sqstm1)
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
115205128 (sqstm1)
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115205128 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
115205128
NCBI-ProteinID:
XP_029626664
Ensembl:
ENSSTUG00000027093
UniProt:
A0A674AVN0
LinkDB
All DBs
Position
13:complement(8407476..8411701)
Genome browser
AA seq
469 aa
AA seq
DB search
MSMTVKAYLLGKEHIPKEIRRFAVDQDVSTSFEYLNRKVVDVFSTLRNVPYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDDTFRLFIKEKKEHRREFPAFAFPGGVPPFTFPPHPGAPNM
GPPPPHGPPPHGHGPHAPPMVHPNVTCDECEGPVAGTRFKCTVCSNYDLCSSCQAKGLHK
EHVLLPIWHPFNNTFDWFPRGKWMRKMRHCMWAQAQNQAQPGPSGSQPGPSGSQPGQAAP
EDSQPSSDASSASSQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVEHEGKRTKVTTPNP
TPPGSGGHPGARSDNGTGGSEGAGANEGDMEVDELSSLGSASGLAKGGKDAGGSGDEEWT
HVTSKEVDPSTGELQSLRVGEEGSLEALGSLTPSQGPSQEPLKSLTLAEAAAYPHLPQDA
DPRLVESLSQMLSMGFTDEGGWLTRLLHTKDCDVGAALDTIHYSKPPQK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaccgtgaaagcctatctccttgggaaggaacacataccgaaagaaattcgt
cgctttgctgtcgaccaagatgtttcaacgagttttgagtatttgaatcgaaaggttgtt
gatgttttctcaacactgcgaaatgtcccctaccaaatgttttacaaagacgaggacggt
gacatgatcgccttctccaccgacgatgagctcatcatgggcctcacctgcatcaaggac
gacaccttccgcctcttcatcaaggagaagaaggagcacaggcgtgagttccctgctttt
gccttcccgggcggtgtccctcctttcaccttcccccctcaccctggagcacccaatatg
ggaccccctccaccccatggcccaccacctcatggtcatggccctcacgcaccccccatg
gtgcacccaaacgtgacctgtgatgaatgcgagggcccggtggcggggacccgtttcaag
tgcactgtgtgctcaaactatgacctttgctcctcgtgccaggccaaggggctccacaag
gagcacgtcctcctacccatctggcaccccttcaacaacacattcgattggttccctcgt
gggaagtggatgcggaagatgagacactgcatgtgggctcaggcccaaaaccaggcccag
cctggtccctctgggtcccagcctggtccctctggttcccagccaggccaggcagccccc
gaggacagtcagccatcctctgatgcctcatctgcttcctcccagcagtcccaggccaat
atggattacctgaagaacattggagaaggggtggcagccatgcttagcccactgggtatc
gatgtggatattgacgtggagcacgaggggaagaggaccaaggtgacgacccccaacccg
accccacccgggtcaggaggccaccccggtgctcggagtgacaacgggacaggggggtct
gagggagcaggggcgaacgagggagacatggaggtggatgagctgagcagcctggggagc
gccagtggtttggctaagggtggtaaagatgccgggggcagtggtgacgaggaatggact
cacgtgacctccaaggaggtggacccctctacaggagagctccagtctctcagggtgggt
gaggagggctcactggaggccctagggtccctcaccccttcccagggtccctcacaggaa
ccactgaagtccctcactctcgctgaggccgcagcctacccccacttgcctcaagatgca
gacccacgcctggtggagtcgctgtcccagatgctatccatgggcttcacagatgagggt
ggctggctcacccgtcttctccacaccaaggactgcgacgtcggggcagccctggacacc
atccactactccaaacccccccagaagtaa
DBGET
integrated database retrieval system
