KEGG   Salmo trutta (river trout): 115205204
Entry
115205204         CDS       T08542                                 
Name
(RefSeq) lysine-specific demethylase 2A-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    115205204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stru03000]
    115205204
   04121 Ubiquitin system [BR:stru04121]
    115205204
   03036 Chromosome and associated proteins [BR:stru03036]
    115205204
Enzymes [BR:stru01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     115205204
Transcription factors [BR:stru03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    115205204
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     115205204
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115205204
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     115205204
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC F-box Cupin_8 LRR_8
Other DBs
NCBI-GeneID: 115205204
NCBI-ProteinID: XP_029626796
Ensembl: ENSSTUG00000030675
LinkDB
Position
13:11820972..11840863
AA seq 1322 aa
MEDQNPRYSKRLRTGTRRRYLDDGISDDEIEGKRTFDLDEKLQSDRFNSNLVKHMEGKDF
TFEYIQREGLRDPLIFEKKDGLGLEMPDSDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMS
MAQWRRYYETPPSERDKLYNVISLEFSHTKLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNSIIDMQYPKVQKYCLMSVQGCFTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLE
LYEDWVLSGKQGDIFLGDKARDCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTNTSHLTPEFQKHSLGVG
LTRDSSENKLNGHAKNGTSEEENKDGDDDEEGKEEERESKVKMEESDEDVSPSPGATKLG
VRVNLTPLELEGLWNLLGKLEELPAHKKCVPAGIRNAPALLHDIRALLEDHRNDDPKLSY
TGKPIVKWPKRPSWYQPPSPSPMDRPRPATPHKPAVPRQARPATSISALRRRRVRCKRCA
ACQRKECGECNFCRDMRRFGGPGRMKKGCMMRQCLAPGLPNSAVCVLCGEGQGKQEPVDA
SPSSTTLMECSNCAQIAHPDCIKVPGEGRINKDLPSCWECPKCYQDKDGSSSQSSSSDED
SMASTGSLTTSKHTHREGIGVGEAGGGLRKGRRGRPPLTSSLSQRRAPPPSQRLLLQQQQ
NRKRAGALELRLRKSIKLERSKILQSQQTSSLELSHKLPGSQRLAHLQRGVSSRLHSPVG
RLSRGRGSFRGSPTGARLQPPQPSLSLAPAGRGEGRRGRGVRLRGGAAGRGQRHGGAEEE
SGSSTSSSSSSCSSDDEEEDRENGVRGGRRDKENRPQRRGTAKEDEGSGESNQNEEEEEA
MDEDWREGEQAQAEPPVLVVSDISDDLMKGSYLTVTLQPSRAKHDPGAIVPKLEAAVTPR
PAPPGQIYTQRKNLARPPLRNHAPDPAPSRSDRHTHIRGSNTHTGGSHQDVMRRRPGRPE
RTNNGASSSRVPPLHLPLSALQDGEREVANGGSEPGCEREVWVSVFRYLTRAELCVCMAV
CKNWYKWSLDKRLWMRINLTVSKAISPQALSGIIKRQPVALDLSWTSISKKQLTWLVNRL
PGLKDLMLSGCSWSSISALSSISCPLLRTLDLRWADGVKDGQIRDLLNPPGCDNRSQLRN
MQSFRLAGLEISDSTLRLVIRHMPLLTRLDLSHCGGLTDQSINLLTAVGSSTRNTLTELN
VGGCSKLTDACLRYLRRLSCLSLLDLRECKGVSRKACEAFISELSVNALYCLSEDKLIQR
IS
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggaagaccagaacccccgttacagcaagcgcttgcgtacggggacgcggcggcgctac
ctcgatgacgggatctcggacgatgagattgaggggaagaggacctttgacctggatgag
aagctgcagagtgaccggttcaactccaacctggttaaacacatggagggaaaagacttc
acgttcgagtacatccagagggaggggctgagagaccctctgatctttgagaaaaaagac
ggcctcggcttagagatgccagactctgatttcagtgtgagtgacgtcaagctgtttgta
ggcagtcggaggatggtcgatgttatggatgtgaccactcagaagggcatcgagatgtcc
atggcccaatggcggcggtactacgagaccccgccctcggagcgagataagctctataac
gtcatcagcctggagttcagtcacaccaagctggagaacctggtgaaacgacccgcctcg
gtggatttgatcgactgggtggacaacatgtggccaaggcacctgaaggagagacagaga
gactcaaccaactccatcatagacatgcagtatcccaaagtgcagaagtactgtctgatg
agtgtccagggctgcttcacagacttccacgttgactttggtggtacgtcggtctggtac
cacatcctgcgggggggcaaggtgttctggctgatcccacccacaccccagaacctggag
ctgtatgaagactgggtgttgtcagggaaacaaggggacatcttcctgggagacaaggct
cgggactgtcagaggattgagctgaagcagggctataccttcatgatcccctccggttgg
atccatgctgtgtacacccctgaggacacgctggtgtttgggggaaacttcctccacagc
ttcaacatccccatgcagctcaacatctacaacatcgaggaccgcacacgagtcccggct
aagttccgataccccttctactatgagatgtgttggtacgtgctggagagatacctctac
tgtctgaccaacacctctcacctcacccctgagttccagaagcactcgctcggtgttggt
ctgactcgtgactcctcggagaacaaactcaacggccatgcgaaaaacggcacgtcggag
gaggagaacaaagacggagacgacgatgaggaaggaaaggaggaggaaagggagagcaag
gtcaaaatggaagagagcgacgaggatgtctccccctctccgggtgccactaagctgggg
gtgagggtaaacctgacccccctggagctggaggggctgtggaacctgctgggaaagctg
gaggagctgccagcccacaagaagtgtgtccccgcaggtatccgcaacgcccccgccctg
ctccacgacatacgggctcttctggaagaccaccgcaacgacgaccccaagctgtcttac
actgggaagcccatcgtcaagtggcccaagaggccgtcgtggtaccagcccccttccccc
tcgccgatggaccgcccgcgcccggccacgccacacaaacccgcggtcccgcgccaggcc
aggcccgccacctccatctcggccctgaggcggcggcgcgtgcgctgtaaacgctgtgcg
gcctgccagaggaaggagtgcggcgaatgcaacttctgcagagacatgaggaggtttgga
ggacctgggcgcatgaagaagggctgcatgatgcggcagtgtctcgctcctggcctgccc
aactcggcggtgtgtgttctctgtggagagggtcaggggaagcaggagccggtggacgct
agtccttcctccacaaccctgatggaatgctccaactgtgctcagatcgcccaccccgac
tgcatcaaggtgccaggggagggcagaatcaacaaggacctgcccagctgctgggagtgt
cccaaatgttaccaggacaaagatggctcctcatcacagtcgtccagcagtgatgaggac
agcatggcgtctacaggttctctcactacgtcaaagcatacccaccgggaagggatagga
gtaggggaggcaggaggtgggctgaggaaggggcgacgtggcagaccccccctgacgtcc
tctctgtcccagcggagggcgccccctccctctcagcgactgctactgcagcaacaacag
aacaggaagagagccggtgcactggagctacgactccggaagagtatcaaactggagcgc
agcaaaatcttacaatcgcagcagacgtcgtctctggagctttctcacaagctcccgggc
tcccagcgtctggcccacctccagagaggggtgtcctctcgccttcactcccccgtcggc
agactgtcccggggccgtgggtccttcagaggctcccctacaggggcacgactccagccc
ccccaaccctcccttagcctggcccccgcaggcaggggagaggggcgcagggggcgagga
gtacggctcagaggaggagcagcaggaagaggacagagacacggtggagcagaggaagag
agtggtagcagtaccagcagcagcagcagtagttgtagtagtgatgatgaggaggaggac
agggagaacggcgtgcggggtggcagaagggacaaagaaaaccggccgcagagacgagga
acagccaaagaagatgaggggagtggggagtccaaccaaaacgaagaagaagaagaggcg
atggatgaagactggagggaaggagaacaggcacaggcggagccaccggtcctcgtagtg
tcggacattagcgacgacctcatgaagggctcgtatctcactgtgaccctacagccgtcg
agggccaaacatgatccaggggccatcgtccccaaactggaggctgcagtcaccccccgc
cctgcccctcccggacagatttacacacaacgcaagaatctggcccgaccacccctcagg
aaccacgccccagaccctgcaccctcacgctcagacagacacacacacatccggggaagc
aacacacacacgggcggctcccatcaagacgtgatgagaaggaggccgggaagaccagag
aggacaaacaatggtgcttcctcctcccgggttcctcctctacacctccctctgtcggct
ttacaggatggggagagggaggtggcaaatggagggagcgaaccgggctgtgagagggag
gtgtgggtatctgtcttccgttacctgactcgtgccgagctctgtgtctgcatggccgtc
tgcaagaactggtacaaatggagcctggataagaggctgtggatgaggatcaatctgacc
gtgtctaaagcaatcagtcctcaggccctgtcaggcatcatcaaacgccagccagtcgcc
ctggacctctcctggacctccatctccaagaaacaactcacgtggctcgtcaaccgcctg
ccagggctgaaggatctcatgttatctgggtgctcctggtcttctatttcggctctgagc
tcgatcagttgccccctcctgcgcacgctggacctgcggtgggccgacggggtgaaagat
ggacagatccgagacctgctcaaccccccaggttgtgataaccgcagtcagctgaggaac
atgcagtctttccgtctggcggggctggagatcagtgactccactctgaggctggtgatc
agacacatgcccctgctgacccgtctggacctgtcccactgcggaggcctcactgaccag
tccatcaacctgctcactgccgtgggttcctccacacgcaacacactcactgagctcaac
gtggggggctgcagtaagctgacggacgcgtgtctgcggtatctccgccggctctcctgc
ctctccctgctggacctgcgggaatgcaagggtgtctcccgcaaagcctgcgaggccttc
atctctgagctgtctgtcaacgccctctactgcctatcagaggacaagctgatccagagg
atatcctag

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