Salmo trutta (river trout): 115205349
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Entry
115205349 CDS
T08542
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115205349
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115205349
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
Bact_surface_Ig-like
Motif
Other DBs
NCBI-GeneID:
115205349
NCBI-ProteinID:
XP_029627087
Ensembl:
ENSSTUG00000001297
UniProt:
A0A673VS97
LinkDB
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Position
13:17475467..17678847
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AA seq
973 aa
AA seq
DB search
MESRQRKHCGGWPVLRLWFSLACLMGATAQLSYSVSEELRPGSVVGNIAKDLGLTVQMII
KRKLRVVSESNAQYFEVNQATGDFIIRQTIDREHMCELSATCSLHVEIVLEDPLAIHRVL
VDIVDVNDNAPQFSTKNISLEISEAAAPGTRFRLESAHDPDVGINSLRTYHLAPNDRFVL
NVETKSDGSKFPELVLENALDRETQASFRLLLTALDGGQPEKSGSTLLLIKILDVNDNAP
VFDKSVKKVSVLENVEKGTLVTKLNATDADYAQNGEISFLFSKYTPDRVLKLFSVDSKTG
EVRVNGHVDYETANEYHLTVQARDGGTPAMEASCNIKVEVTDVNDNSPEVMLTSLTSPIQ
EDAAPGTVIALISARDLDSGKNGKVTLKVQSGLPFKLNSAFGEHYNLITSGNLDRETMAD
YTVVIMATDAGSPPLSSRTTFVVKLSDVNDNAPSFSQPSYSVDVPENNAPSTPIAMVMAS
DPDIGDNARVSFSILPSMVQGSPISSYVYINPETGHIYSMRSLDHETLNAFRIEVQARDA
GAPPRTANVTVHVFVVDLNDNAPLIVYPPFPQDTVLQLSVPQSAGPGHLINKLLGVDPDS
GHNAWLFYSIAPGPHAALFLITPHTGELRTTRKLAEEEGGSAYDVIVVIQDNGEPTLSTT
VAITVTVEEKGASATPMDNRKTSVMRRTGMSDITLYLIISLACVSAVSFLTFLILMVRCL
RHRSDHGGTGCCYSHYRPSRAYHQRPNKDLHLQLNTDGPIRYMEVVGGAQDPPGTRTYRP
CYSTTSSRSDFMFVKTPMMSHNNTLSMTLNRKHLMNSANEQKPPNADWRFTQGQRPGPSG
AGGPPEMTMGTGPWPNPPTEAEQLQALMAAANEVSEATATLGPGTMGLSTRYSPQFTLQH
VPDYRQNVYIPGSTATLTSNPQQQQQQMLMQQQMAAQQQALQAQPAEASAQPEPPKAAQT
PASKKKSTKKEKK
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagacagaggaagcactgcggagggtggcccgtgctgaggctatggttttcc
ctggcgtgcctcatgggcgcgaccgcccagcttagttactcggtgtcagaggagctccgg
ccggggtctgtggtcgggaatatcgctaaggatttgggtctcaccgttcaaatgataatt
aagagaaaattgcgggtggtctcggaatctaacgcgcagtacttcgaggtgaaccaggcg
actggggattttattattagacagacaattgacagggaacacatgtgcgaattaagtgca
acatgttcactacatgttgagattgtactcgaggaccctttagcgatacatcgtgttctt
gtggatattgtggatgtgaatgacaatgcgccgcagttttccactaagaatatttccttg
gagatatcagaggcggccgcgccgggcacccggttccgactggagagtgcgcacgatcca
gatgtgggtatcaactctctgcgtacttatcacctcgcacctaacgaccgctttgttttg
aatgtggaaacgaaaagtgacgggagtaagttcccggagttagttttagagaatgctttg
gatagggagacgcaggcctcgtttcgcctgttgcttactgccctcgacgggggacagcca
gagaagtctggctccactcttctactcattaaaattctggacgtcaatgacaacgcgccc
gtctttgacaagtcggtgaaaaaggttagcgtgttggagaatgttgaaaagggcacttta
gtaacgaaactgaacgcgaccgacgcggattatgctcagaacggggagatctccttcctg
tttagtaaatacacgccggaccgggtgctcaagctattcagcgtggattcgaaaaccggt
gaggtccgtgtgaatggtcacgtggattatgagacagcgaatgagtatcacctcactgtg
caggccagggatgggggaacccccgccatggaagcatcctgtaacatcaaagttgaagtc
actgacgtgaatgataactctccggaggtgatgttgacgtcactgaccagtcctatccag
gaggacgcagcaccgggcacagttatcgccctcatcagcgcaagggacctggactctggt
aagaacggcaaggtaacattaaaggtccagtctggcctgcccttcaaactcaactccgcc
tttggagagcactataacctcattacctccggcaacctggaccgagagaccatggctgat
tacaccgtggtcatcatggcgaccgatgctggctcccctcccctgtcgtcgcgtacgacc
ttcgtggtcaagctgtcagacgtgaatgacaacgctccgtcgttctcccagccctcctac
tcagtggacgtccccgagaacaacgcccccagcacccccatcgccatggtgatggcctct
gacccggacataggggacaatgcccgcgtctccttctccatcctgcccagcatggtccag
ggctcacccatctcctcatacgtctacatcaacccagagactggccacatctatagcatg
cgctccctggaccatgaaaccctcaacgccttccgcatcgaggtgcaggcccgagacgcc
ggggcgccgccccggaccgccaacgtcacggtgcatgtgttcgtagtggatcttaacgac
aacgcgcccctcatcgtgtacccccccttcccccaggacacggtgctgcagctcagtgtg
ccgcagtcggctgggccagggcatctcattaataaactgctgggggtggatcctgatagt
ggtcataacgcctggttgttctactccatcgcccccgggcctcacgctgctctgttcctc
atcacgccccacaccggcgagctccgcaccactcgcaagctagctgaggaggagggtggc
tccgcctatgacgtcatcgtggtcatccaggacaacggcgaacctactctctccaccact
gtggccattacggtaaccgtggaggagaagggcgccagcgccacccccatggacaaccgg
aagacgtcggtgatgcggcggactgggatgtctgacatcaccctgtacctcatcatctca
ctggcctgcgtctcggccgtgtccttcctcaccttcctcatcctcatggtccgatgcctc
cgccaccgcagcgaccatggagggaccggctgctgctacagccattaccggcccagcagg
gcctaccatcagaggcccaacaaggacctccacctgcagctcaacacagatggacccatc
cgttacatggaggtggtgggaggggctcaggaccccccaggaacacgaacatacagaccc
tgctactccaccacctccagccgcagtgacttcatgtttgtcaagacacccatgatgagc
cataacaacacactcagtatgacactcaacaggaagcacctaatgaactcagccaatgag
caaaagcctcctaacgccgactggcgcttcacccaaggccagagacctggacccagtggg
gctggaggcccccctgaaatgaccatgggaaccggaccctggcccaacccccccaccgag
gctgagcagctccaagccctgatggccgctgccaacgaagtgagtgaggcgaccgccacc
ctggggccgggcaccatgggtctaagcacccgttacagcccccagttcaccctgcagcac
gtgcccgactaccgtcagaacgtctacatccctggcagcacggccaccctgacctccaat
ccccagcagcagcagcagcagatgctgatgcagcagcagatggcagcccaacaacaggcc
ctgcaggcccagcccgccgaggcctcggctcagcctgaaccccccaaggctgcccagacc
cccgcctccaagaagaagtccaccaagaaggagaagaagtag
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