Salmo trutta (river trout): 115205391
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Entry
115205391 CDS
T08542
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
stru04510
Focal adhesion
stru04518
Integrin signaling
stru04519
Cadherin signaling
stru04540
Gap junction
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115205391
04020 Calcium signaling pathway
115205391
09133 Signaling molecules and interaction
04518 Integrin signaling
115205391
04519 Cadherin signaling
115205391
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115205391
04540 Gap junction
115205391
09142 Cell motility
04810 Regulation of actin cytoskeleton
115205391
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stru01001
]
115205391
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115205391
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115205391
Protein kinases [BR:
stru01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115205391
CD molecules [BR:
stru04090
]
Proteins
115205391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
VEGFR1-3_N_Ig-like
Ig_2
ig
V-set
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
Psg1
Motif
Other DBs
NCBI-GeneID:
115205391
NCBI-ProteinID:
XP_029627197
LinkDB
All DBs
Position
13:19058605..19108130
Genome browser
AA seq
1094 aa
AA seq
DB search
MRTVRVSPLHLTALLTALLHFCPEYRCVEISPSNSEVIMTPGDSMIFTCSSWGTVGWRFK
RNDDIPYFGVENQNTTSVLILENVTWRHTGVYVCAEAWTDEAREVAVFVPDPEVWFIESS
HGMVTKTSEEGTIPCVVTNPQINVTLYETDSDMHLNGVYIPSEGYRAALEDRTYVCRGEL
NGEEKESRAFYVLSIVVPETIDAYINASKTVLKQGEPLTVNCTVHGVELVFFSWDYPNRD
VDFIEPLTDILSSQSMRSCLTVSKATLANTGQYVCHVHESVQDQRATANINITILERGFV
ELRSVQERNVSAQLHQNVELRVEIESYPAPRVHWTKDNATVNGDNTVITRQEHETRYVSM
LTLVRIRTEQKGLYTVLVANGDDTKEVTFDLEVKVPPQITDLSDHHLPGKRHAVTCVAEG
VPSPSIQFFSCDSMLKCSNRSTVWQPLVSDTETLSIQTNISFNESRKVGQVRSQVTFHKP
QQVTVRCEASNEGGVRRRDVKLVSSTLFSQVAVLAAVLPLVVILITSIIILIAVWRKKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMARDSLVLGRTLGSGAFGRVVEATAYG
LGHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVT
EYCRYGDLVDYLHRNKHTFLQYYAEKNQEDSGCRISGGSTPLSQRKGYVSFGSEFDGGYM
DMSKDEPTVYVPMQELKDTIKYTDIQPSPYESPYQHHLYQEQDQTTVDSALVISDCPTLS
YSDLIGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDSNYVS
KGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGAPYPDLPMNELFYSALKR
GYRMAKPNHATDEVYEVMQKCWDEKYERRPEFSFLVHTMGNMLTDSYKKRYCQVNDEFFK
RDHPAVVRTKPRLSSHFPTPALTPSTAPATPQDTNPYPFTGDFRPEADGEEASYNDYIIP
IPDPKPEEEVCSEADGMPTKSIASSRALEDEEADSISQETVEADTIPEEKYLHANQALIP
LESSGTPEAEDSFL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgtcagagtgtcccctctccatctgacagccctactaacagctcttttgcac
ttctgccctgagtaccgttgcgtggagatctcccctagcaacagcgaggtcatcatgaca
ccgggcgactccatgatctttacctgttccagctgggggacagtcggatggaggttcaag
cggaatgacgacattccctattttggagtggagaaccagaacacaaccagtgttctcatt
ctggaaaacgtgacgtggagacacacaggagtgtacgtctgtgccgaggcttggacggac
gaggctagagaggtggcagtctttgtgccggaccctgaagtgtggttcattgagagctcc
cacggcatggtgaccaagaccagcgaggaggggaccatcccctgtgtggtcaccaacccc
cagatcaacgtcaccctctacgagacggacagtgacatgcacctaaatggggtctacatc
cccagtgagggctacagggcagccctggaggacaggacctatgtgtgtcgtggggagctg
aacggggaggagaaagagtcccgggccttctacgtcttaagtattgttgtcccggagaca
atcgacgcctacatcaatgcgtctaagactgtgctgaagcagggcgagcctctgacagtg
aactgcacggtgcacggagtggagctggtcttcttctcctgggactaccccaacagagac
gtggacttcatcgagccattgaccgacatcctgtcgtcccagagcatgcgctcctgcctc
accgtctctaaggcgacgctggccaacacggggcagtatgtgtgtcacgttcacgagagt
gtccaggaccagagggccaccgccaacatcaacatcaccatcctcgagcgaggcttcgtg
gagctgaggtctgtccaggagcgtaacgtctcggcccagctgcaccagaacgtagagctg
agggttgagatcgagtcctaccccgctccacgtgtccactggaccaaagacaacgccacc
gtcaacggagacaacaccgtcatcaccaggcaggagcacgagaccaggtacgtcagcatg
ttgaccttggtgaggatcaggacggaacagaagggactttacactgttctcgtcgccaac
ggagacgacaccaaggaagtgacatttgatctggaggtcaaagttccccctcagatcaca
gacctgtcggaccaccacctcccagggaagaggcatgcagtgacctgtgtggccgagggg
gtcccctccccctccatacagtttttcagctgtgacagcatgctcaagtgcagtaaccgg
agcacagtgtggcagcccctggtgtcagacactgagaccctgagtattcagaccaacatc
agcttcaatgagagccgtaaggtgggccaagtccgcagccaggtcaccttccacaagccc
cagcaggtgaccgtccgctgtgaggccagcaacgagggaggagtccgcaggagagacgtc
aaactggtgtccagcactctgttctcccaggtggcagtgttggctgcggttctacccctg
gtggtcatcctcatcacctccatcatcatcctcattgctgtgtggaggaagaagcctcgc
tatgagattaggtggaaggtgatagagtcggtgagtctggatggccatgagtacatctac
gttgaccccatccacctgccctacgacctggcctgggagatggcccgagacagcctggtg
ctgggtcgtactcttgggtccggggcgtttggcagggtggtcgaggcgactgcctatggt
ctcggtcattcccagtccagcacgaaagtggcagtgaaaatgctcaaatccacagccagg
aggagtgagacccaggctctgatgtcagagctgaagatcatgagccacctggggcctcat
ctcaacatcgtcaacctgctgggagcctgcaccaaacagggtcctctctacctggtgacg
gagtactgtcgctatggagacctggtggactacttacacaggaacaagcacacattcttg
cagtactacgctgagaagaaccaggaggactctggctgccgcatctctggagggagcacc
cctctcagccagaggaaaggctacgtgtcgtttggcagtgagtttgacggtggctacatg
gacatgagtaaggacgagcccacggtgtacgtccccatgcaggagcttaaagacaccatc
aaatacactgacatccaaccttctccctatgagtcgccctaccagcaccacctttaccag
gaacaagaccagaccacagtggacagtgccctggtcatcagtgactgccctaccctcagc
tattctgacctcattggcttcagctaccaggtggccaagggcatggagttcctcgcctcc
aagaactgtgtccatcgtgacctggctgccaggaacgtgttgatctgtgaggggaagctg
gtgaagatctgtgactttggtctggccagagacatcatgcacgactccaactacgtatcc
aaaggcagcacgttccttcctcttaagtggatggccccagagagtatcttccataacctg
tacaccaccctgagtgacgtgtggtcctacggcatcctgctctgggagatcttcaccctg
ggaggagctccctaccctgatctgcccatgaatgagctgttctacagtgccttaaagaga
ggatatcgcatggccaaacctaaccatgccaccgatgaagtttatgaagtcatgcagaag
tgctgggatgagaagtacgagagaaggccagagttctcttttctggtgcacacaatgggg
aacatgctcacagacagctataaaaagagatactgccaggtcaacgatgagttcttcaag
cgtgaccacccagccgtggtccgcaccaaacccaggctctcctctcacttcccaaccccg
gccctaaccccctccaccgcccctgccaccccccaggacaccaacccctaccccttcact
ggggacttcagaccggaggcagatggtgaggaagcttcctacaacgactacatcatcccc
atcccggaccccaagcctgaggaggaagtctgctccgaggctgacggcatgccaacgaaa
agcatcgcgagttctcgggctctggaggacgaggaggctgattccatctcccaggagaca
gtggaggcagacacaattccagaggagaaatatctccatgccaaccaggccctgattcca
ctggagtcctctggaacaccggaagcggaagacagcttcctgtag
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