Salmo trutta (river trout): 115205647
Help
Entry
115205647 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
stru04210
Apoptosis
stru04217
Necroptosis
stru04510
Focal adhesion
stru04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115205647
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115205647
04217 Necroptosis
115205647
09144 Cellular community - eukaryotes
04510 Focal adhesion
115205647
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115205647
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115205647
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115205647
03029 Mitochondrial biogenesis [BR:
stru03029
]
115205647
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115205647
Peptidases and inhibitors [BR:
stru01002
]
Peptidase inhibitors
Family I32: IAP family
115205647
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115205647
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115205647
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
DUF2039
Motif
Other DBs
NCBI-GeneID:
115205647
NCBI-ProteinID:
XP_029627697
Ensembl:
ENSSTUG00000001715
UniProt:
A0A673VUQ9
LinkDB
All DBs
Position
13:31607598..31615668
Genome browser
AA seq
465 aa
AA seq
DB search
MSGHGRDSDLESDHAVDWSMMDMRLDSFRGSPLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDTPAERHAEVSPNCKFLSCTHRSRVNSLQGAMLTNEPHYNEDAEDMEFR
LRTGEVVDETTYPMVPHMVSEDSRFNTLDPWPSTSPVRPRELAQAGLFYLGESDRVQCFC
CGGILGGWEPGDTAWGEHSKHFPYCFFILGHDVGNLPSQAGREVEETRPRPGPRVPMQSF
EERLGSFAGIQHPIDHERLARAGFYNTGTPDRVVCFCCGGGLKGWQPDENPWEEHAKHYP
GCRFLLAEKGQEFVSSVQLQGPGWNNAASSHLNGCSSQGTEVLRSAMAQRAVEMGLEPAL
VERTILERIRRAGTGYSTLETLLQDCFNRGPDSDAETAENHDEDPLEKLRKLQREKQCKV
CMDRDISIVFIPCGHLVVCKECSEALGKCPICCAAITQKIKTYIS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccatgggagagacagtgatctggagtcagaccacgcagtagactggtccatg
atggacatgcggctggactcgttccggggttcccccctggcccagcaggtgtcagcggaa
aggctggcccgcgctgggttttacttcacaggacaggctgacaaggtgcgctgcttcagc
tgccacaaaactgttgagaactggtgtggaggggacacacccgcagagaggcacgcggag
gtctcccccaactgtaagttcctgagctgcacccatcgttccagggtcaactctcttcaa
ggtgccatgctgaccaacgaaccccactacaacgaagacgccgaggacatggagttccgc
ctgagaacgggagaggtggtggatgagaccacctaccccatggtcccgcacatggtcagc
gaagactcccggttcaacaccttagacccgtggccctccacatccccggtccggcctaga
gagctggcccaggcagggctcttctatctgggggagagcgaccgggtgcagtgcttctgc
tgtggagggatactggggggctgggagcctggggacacggcgtggggggagcactccaag
cacttcccctactgcttcttcatattggggcatgatgtggggaacctcccctctcaggcg
gggagggaggtggaggagaccaggccacgcccgggtcctcgggtccccatgcagagcttt
gaggagaggctaggcagctttgcaggaatccagcaccctattgaccacgagaggctggcc
agagcaggcttctacaacacaggaactccagaccgtgtggtgtgtttctgctgtggtgga
ggtctgaagggctggcagccggacgagaatccctgggaggagcacgccaaacactatccg
gggtgtcgttttctgctggcagagaaaggacaggagttcgtcagtagcgttcagttacaa
ggtcctggctggaacaatgctgcttcaagtcacctgaatggatgttcaagtcaaggaaca
gaggtgctgaggtcagccatggcccagagggcggtagaaatgggtctggagcctgccctg
gtagagaggactatactggagaggatacgcagggctgggacaggctactccactctggag
actctgctgcaggactgctttaacagaggccctgacagcgacgcagagaccgcagagaac
catgatgaggatccacttgagaaactacggaagctgcagagggagaaacagtgcaaagtg
tgtatggacagagacatcagcatcgtcttcatcccctgtgggcacctggtcgtctgcaag
gagtgttccgaggcgctcggcaagtgtcccatctgctgtgcagccatcacacagaagatc
aagacatacatctcctaa
DBGET
integrated database retrieval system
