Salmo trutta (river trout): 115206681
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Entry
115206681 CDS
T08542
Symbol
tiam1
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04530
Tight junction
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115206681 (tiam1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
115206681 (tiam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115206681 (tiam1)
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
115206681 (tiam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PDZ
PH_9
PDZ_6
SOS1_NGEF_PH
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
115206681
NCBI-ProteinID:
XP_029629739
Ensembl:
ENSSTUG00000004224
LinkDB
All DBs
Position
13:86815151..86939218
Genome browser
AA seq
1664 aa
AA seq
DB search
MGNVESQNGDRAFYGTQHGHLSRKHMSRSLRISNKHHQSQSSSGSTCRSRDCHASRGKVD
HCNSETSTRSSSTPSIPQSLADHSLEPFNQTNVLSDFSSPIWVDRMAMNLRPVSFHTRLD
NPSVGLRLDAASPGAGPHEPQGLQDRGLGLYSNTGEMTYLQKTRDGPREPREVVSFKKKR
SKSADMWREDSLEFSLSDLSQEHLTSTEEIIDTEEAEDFPDCDGLLGLVSPEGLEGLDAV
GRANSLDQLYWGQKTPTRRAAGRYAKWHHDANRSAREGDKMVSPEEEEEDDGNSYGAYTL
PCRRSHCLSEGLTNHRAATCSTMQGRRAQTIQNVTAGEGSEYEDSGIDGVMASGVEHQSR
RYKTISMSFSVCSAAGRSLFAGSDSGSSSGGAPSEGVQGVYENFRQELEMSSCQTESLEE
AGSALSDEQSTMSSAYQSNPLHSVVQGTVRKAGRLAVKNFLVHKKSKKVESATRRKWKSY
WVCLKGCTLFFYETDGRSGIDHNSVPKHAAWAENSIVQSVPEHPKKDFVFCLSNSLGDAF
LFQTCSQTELENWITAIHSACAAAVARQHHREDTVRLLRAEIKKLEQKIDMDEKMKKMGD
MQLSAVTDAKKRKTILDQIFLWEQNLEQFHMGLFRFRCYLSSLQGGELPNPKRLLAFASR
PTKLAMGRLGIFSVSSFHALVAARTESGGRRRTQAMSRTSSSKRKSRFSSLWGLDTTSKK
KTKAHTTINQVFVDGEEPVKKPLDGIYDVDTARESVKSHEGTAKSLPQVNSDSHMTDSDI
WVPDHLTPSWVCLPNDQPVLAIIQPGESVLDVLETICKAHQLDPTKHFLRLKFLMDNQVQ
FFIPKPDEQLCDLLYKEIELGSKITKVIQFDRDESCMIGYGFSISVVEEDSVQQLYITDV
KPGGLAFARGLNAGDEILQLNGKDSCSLNFSDMKEAFSQASLSLTVNTLPSRDRRQICYL
PPRRSDAQEDLHTDIFSVNQEEILDDGDGLMLDSSGDSLDDDSEIFSEADQCRKSTEQVA
AFCRSLHDMNPSECATTSTSPSLDSPFRPIATGTASRQLSDADKLRKVICELVETERAYV
KDLNCLIGRYLTPLQKETCLTQDELDILVGNLPEMVEFQVEFLKTLEDGTRLVPDLEKLE
SVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVKAKTDADFKAFLEERNPKQ
QHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLNVAMKAMNKVASHINEMQK
IHEEFGLVFDQLIAEQSGDKKEVADLSMGDLLLHTSVAWINPPSSLGKWKKDPQLAAFIF
RTAVVFVCKDGSKQKKKMGGSHRVSSVSSDDKDPFHFRHMISTDTLQVRALNNQDGEGSA
ACEIVHIKSESEGRPERTFHLFCSSVDCMKDFLKTVHSILRDKQRRQLMKTESLPPNQQY
VPFGGKRLCALKGARPAMNRAVSDPARTLGRRKLVRNRFTIDTDIVFDSEPDQESLLSPL
SPEEPEGQGQREGQGRGEVQAGDTDRWVEEQFDLERYEEEQEAQKETEVKGGGDVKQTEI
LSGDEDFCLSVSGPSTVSLSNTDLEGPVGALSLGEEGQERGPKHPQPQGAMETTTPGMRL
SHLGKQCDLAGMSVDDQGAREEGEDIWLRRENCPLDCGAQTLQR
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgtggagagccagaacggcgaccgtgccttctacggcacccaacatggccac
ctgtcccgtaaacacatgtctcgatctctccgcatctccaacaagcaccatcagtcccag
tccagctctggttccacctgccgttcccgtgactgtcacgcctcgcgaggcaaagtagat
cactgtaactctgagacctccacgcgttccagcagcacccctagtatcccacagtcctta
gcggatcactccctggagcccttcaaccagaccaatgtcctgtcagacttctcctctcct
atctgggtggaccgcatggccatgaatctccggcccgtctccttccatacccgcctagac
aacccgtctgtagggctccgtctagacgcagcgtcacctggggctggcccccatgaaccc
cagggtctacaggacagaggactaggcctatacagtaacacgggggagatgacctacctt
cagaagaccagagacggacccagggaaccccgagaggtggtcagcttcaagaagaagaga
tccaaatcagccgacatgtggagagaagacagtctggagttcagtctgtcagacctcagc
caggaacacctcaccagcacagaggagatcatcgacacggaggaggcagaggacttccct
gattgtgacggcctgctggggcttgtgtcccctgagggtctggagggtctggacgcagta
ggccgggccaactcccttgaccagctctactggggtcagaagacaccgacccgccgggcc
gctggacgctacgctaagtggcaccatgacgctaaccgctccgcccgggagggtgataag
atggtgtctccggaggaggaagaggaggatgatgggaactcgtacggagcttatactctg
ccctgccgacgctcacactgcctgtctgaggggctaaccaatcaccgggctgccacctgc
tccaccatgcagggacgcagggcacagaccatacagaatgtgactgccggagagggcagt
gagtacgaggacagtggcatcgacggggtgatggcgtcgggggtggagcatcagtcccgg
cgctataaaaccatttctatgtccttctccgtgtgctcggcggcggggcggagcttgttc
gctggcagtgacagcggaagcagcagcgggggagcgcccagtgagggggtccagggggtc
tacgagaacttcagacaggagttggagatgagctcgtgtcagacagagagtctggaggag
gcggggtcagccctgagtgacgagcagagcaccatgagttcagcctaccaatcaaatccc
ctgcacagcgttgtccagggaaccgtgcggaaggcaggccggctggccgtcaagaacttc
ctggttcacaagaaaagcaagaaggtggagtcagccaccaggaggaagtggaagagctac
tgggtctgcctcaaaggatgcactctcttcttctatgagacggacggacggtcggggatc
gaccacaacagtgttcctaaacatgcggcgtgggctgagaacagtatcgtacagtccgta
cctgaacaccccaagaaggactttgtcttctgcctcagcaactctctaggggacgcattt
ctcttccagacctgcagtcagacggagctggagaactggatcacggccatccactcggcg
tgcgcggcggcggttgccaggcagcatcaccgggaggacacggtgcgtctgttgagggcg
gagattaagaagctggagcagaagatcgacatggacgagaagatgaagaagatgggagac
atgcagctcagtgccgtgaccgacgccaagaagaggaagacaatactggaccagatcttt
ctgtgggagcagaacttggaacagttccacatgggtctgttccggttccgctgttacctg
tccagtctgcagggaggggagctgcccaaccccaaacgcctgctagccttcgcctccaga
cccactaaactggctatgggacgcctcggaatcttctctgtgtcgtcctttcatgcgctg
gtggcagcccgtacagagagcggggggaggagacgtacccaggccatgtctcgtacctcc
tcatccaaacgtaagagcaggttctcctctctgtggggcctggacactacttccaagaag
aagaccaaagcccacaccaccatcaaccaggtctttgttgatggggaagagccagtgaaa
aagcctctggacgggatctatgatgtggacactgccagggagagcgtgaagagtcacgag
gggacagcgaagagccttcctcaggtcaactcagacagtcacatgacagacagtgatatc
tgggtgcctgaccacctgaccccgtcctgggtgtgtctacctaacgaccagcctgtcctc
gccatcatccagcctggagagtctgttctggacgttctggagaccatctgcaaggcccac
cagctggatcccaccaaacatttcctgcgtctcaagttcctcatggataaccaagtccag
ttcttcatccctaaacctgacgagcagctgtgcgacttgctttataaagagatagagctg
ggctccaaaataaccaaagtcatccagttcgacagggatgagtcctgtatgattggttac
gggttctccatctcagtggtagaggaggattcggtgcagcagctctacataaccgatgtg
aagcctggaggattggccttcgctagaggtctgaatgcaggcgatgagatcttgcagctg
aatgggaaggactcgtgcagtctgaacttctcagacatgaaggaggcgttctcccaggct
tctctgtccctgaccgtcaacactttgccctctagggaccgacgacagatctgttacctt
cccccccgacgctctgacgcacaggaagacctccacacagacatcttctctgtgaaccag
gaggagattctggatgacggggatggtctgatgctcgatagttccggagacagcctggac
gacgactctgagatcttcagcgaggcagaccaatgcagaaagagtacagagcaggtcgca
gcattctgccgcagtctccatgacatgaatccgtctgagtgtgccacgacctccacatcc
cccagcctggactcgcccttccgtcccattgccaccggcaccgccagccgccagctttcc
gacgccgacaagctacgcaaagtaatctgtgagctggttgagacggaacgcgcctatgtt
aaagatctcaattgtctcatcgggaggtacttaacccctctgcagaaggagacgtgcctc
actcaggatgagctggacattctggttgggaacctgcctgagatggtcgagttccaggtg
gaattcctgaagactctcgaagacgggaccagattggttccagacctggagaagctggag
agtgtggaccagttcaagaaaatcctcttctctctaggaggttccttcctgtactatgca
gaccgttttaagatctacagtgcattctgcgccagccacaccaaagtccccaaggtgctc
gtaaaggctaagaccgatgcagacttcaaggcgtttctggaagagaggaaccctaaacag
caacactcctcaaccctggagtcctacctgatcaaacccatccagagagtcctgaagtat
ccactactactgagagagctgtactcactgactgaccctgacagtgaagaacactatcac
ctgaatgttgctatgaaggccatgaacaaggtggccagtcacatcaatgagatgcagaag
atccacgaggagtttgggttggtgtttgaccagcttatagcagagcagagtggagacaaa
aaagaggttgctgatctgtcgatgggtgacttgctgctccacaccagcgtagcctggatc
aaccctccctcctccctgggcaaatggaaaaaagacccccaactggctgcattcatcttc
agaacagccgtggtgtttgtgtgtaaggatggatccaagcagaagaagaaaatgggtggc
tcccatcgagtgtcgtccgtctcgtctgacgacaaggacccgttccacttccgtcacatg
atctccacagacaccctccaagtccgagccctcaataaccaagatggagagggctctgcc
gcgtgtgagatcgtccacatcaagtccgagtcagaaggacggccggagaggacattccac
ctgttctgcagttctgtggactgtatgaaggacttcctgaagacagtccactccatccta
agagataaacaacgacgtcaactgatgaagacagagtctctacctcccaaccagcagtat
gtccccttcggaggcaaacgcctctgtgccctgaagggagccagacctgccatgaacaga
gcagtgtcagacccggcgaggaccctgggccggaggaaactggtgaggaaccgtttcacc
atcgacacagacatcgtcttcgacagcgagccagaccaggagtcccttctgtctccactg
tctcctgaagagcctgagggacagggacaaagggaaggacagggacggggcgaggtgcag
gcaggggatacagaccgctgggtggaggagcagtttgacctggagcgctacgaggaggag
caggaggcgcagaaggagacagaggtgaaaggaggaggagacgtgaaacaaacagagatc
cttagtggtgatgaggatttctgcctgtctgtcagtggaccctccactgtatcactgtcc
aacacagacctagaggggcctgtaggggccctgtccctgggagaggaaggccaagagagg
ggccctaaacacccccagccccagggagccatggagaccaccacaccagggatgagactt
tcccatctggggaagcagtgtgacctagctgggatgagtgtggatgaccagggggctagg
gaggaaggtgaggacatctggctacgcagggagaactgtcctctggactgtggtgctcag
acactacagagatag
DBGET
integrated database retrieval system
