Salmo trutta (river trout): 115208506
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Entry
115208506 CDS
T08542
Name
(RefSeq) TNF receptor-associated factor 5-like isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04217
Necroptosis
stru04621
NOD-like receptor signaling pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115208506
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115208506
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115208506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115208506
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
115208506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-TRAF_2
TRAF3_RING
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
ATG16
EzrA
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
115208506
NCBI-ProteinID:
XP_029632479
Ensembl:
ENSSTUG00000017912
LinkDB
All DBs
Position
14:60180773..60192979
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AA seq
572 aa
AA seq
DB search
MATKESDLSGSGGISRQNSGVGGQWESDLTAVQHSLKFVKNLEEHYVCPTCKAVVLNPHQ
TGCGHIFCYRCIQGLLENSPATTPTCPLDRGLIKSDEVFQDNCCKREISNLEVYCTNSPN
CSHRMTLCRLQEHLQACQFESLRCSNTGCSEILQRKDLQEHLRISCSYRMEPCHYCKHPY
TCCQLEEHERYTCPEVEIKCPNKCSQMIKRCMLEDHADQCPEVQTDCVYKKYGCSVRERR
AQVQVHEKTALNHHILLVLGSNTKLETLMEILQQEVLLRHKELQERSRQVSGLEEVVRPL
AQQVSRCDNTLSAVQRSLEDQRDHISSVQLQLEELSSVFGPGVAREELGQIRASLDALRQ
QVSVTEGLKDHLGELKETYMRHSRLLSIHTAQLECNEEHFRELESTSYDGKLIWKLRDYR
KRKEAGARGQGPCLSSTPFHTGRSGYKMAARAYLNGDGAGRDTHLSLYVVLMRGDFDPLL
PWPFRQPVSLSVLDQSGTNNHLTMSFKPDPENTSFHRPGSAAATASAPTNVASGFQCFAS
HAQLETPKNAIYVRDDTLFVKVKVDTSGLEDL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggagagtgacctgagtggatccggaggaatctccaggcagaattcggga
gtggggggacaatgggaatcggacttgactgcggtgcagcacagtttgaagtttgtgaag
aacctggaagagcactatgtttgtcccacctgtaaagcagtagttctcaacccacaccaa
accggctgcggacacatcttctgctaccgctgcatccaagggctcctggaaaactcccca
gccaccaccccgacatgtcctttggatagaggtttgatcaaatctgatgaggttttccaa
gacaactgctgcaaaagggagatatcaaatttagaagtctactgcacaaactcccccaac
tgctcccacagaatgacattatgtcggttgcaggagcatctacaggcatgtcagtttgag
tcattgcggtgttccaatacaggctgcagtgagatcttgcaacgcaaggatttgcaggag
cacctcagaatcagctgctcctatcgtatggagccctgtcactactgcaagcatccttac
acatgctgccaactcgaggaacatgagaggtatacatgcccagaggttgaaatcaagtgc
cccaacaaatgctcccagatgattaaaagatgcatgcttgaagaccatgctgaccagtgt
cctgaggtgcagacggactgtgtttataagaaatatggctgctctgtccgggagaggaga
gcccaagttcaagttcacgagaaaaccgctctcaatcaccacatcctcctggttctgggg
agcaacaccaagctggagacactgatggaaatcctccagcaggaggtgctgctgaggcac
aaggagctccaggagaggagccgccaggtcagcggtctggaggaggtggtccgcccgctg
gcccagcaggtcagccgatgtgacaacaccctgtctgcagtacagcggtctctggaggac
cagagggaccacatctccagcgtccagctccagctcgaggagctgtccagcgtgtttggc
cctggtgtggcccgggaggaactgggccaaatcagagcgtccctggatgccctcagacag
caggtgtccgtcacggaggggctcaaagaccacctgggggagttgaaggagacctacatg
cgccactcgcgcctcctcagcatccacacggcgcagctggagtgcaacgaggagcacttc
agagagctcgagtccacctcatacgacggcaagctcatctggaagctccgcgactaccgc
aagaggaaggaggccggggcacgaggccagggaccgtgcctgagcagcacgcccttccac
acgggccgcagcggctacaaaatggccgccagggcctacctgaatggcgacggggcaggc
cgggacacccacctgtctctctacgtggtcctcatgaggggcgacttcgaccccctcctg
ccctggcccttcagacagcctgtgtcattgtcagtgctggatcagagcggcaccaacaac
cacctaactatgagtttcaaacccgaccctgaaaacactagcttccaccggcccggctcg
gccgctgcaaccgccagcgcccccaccaacgtggcctctggtttccagtgctttgcctcg
catgcccagctggagacgcccaagaacgccatctacgtgagagacgatacgctctttgtt
aaggtcaaagtggacacgagcggtttggaggacttgtag
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