Salmo trutta (river trout): 115208527
Help
Entry
115208527 CDS
T08542
Name
(RefSeq) presenilin-2-like isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115208527
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115208527
Peptidases and inhibitors [BR:
stru01002
]
Aspartic peptidases
Family A22: presenilin family
115208527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF6541
Oxidored_q3
Motif
Other DBs
NCBI-GeneID:
115208527
NCBI-ProteinID:
XP_029632515
Ensembl:
ENSSTUG00000024383
LinkDB
All DBs
Position
14:61439768..61453394
Genome browser
AA seq
506 aa
AA seq
DB search
MTSLLLFCLSSEIRAIAESLSSLTSKNRRGFLGLVYVKLWIKKNFAAVSHSSAVANIPSM
STSDSDEDSYNERTALVASEIPSVPSYQQDPDQPQPADMEPRRRPVAPEPAAEPPSLDRS
AVEREPVDLEEEEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTEKNGQQLIYTP
FTEDTDTVGERLLNSVLNTIIMISVIVVMTIFLVVLYKYRCYKFIHGWLILSSLMLLFWF
SFMYLGEVFKTYNLAMDYPTVAMIIWNFGAVGMICIHWKGPLQLQQAYLIAISALMALVF
IKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMIWMVG
MANPARNAEPTNQDTDEEAHQSEGSALARDWVEPETQVSSGMNRSYSTEDDLDEEDRGVK
LGLGDFIFYSVLVGKAAATGGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISITF
GLVFYFSTDNLVRPFMDNLAAHQFYI
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgacttccttgttgctgttttgcttgtcgtcagagataagagcaattgcagaatctctc
tcttctcttacatccaagaacagacgcggtttccttggtcttgtttatgtcaaattgtgg
attaagaagaattttgcagctgtgtcccactcttctgccgtcgctaacattccatccatg
agtacctcagacagtgacgaggactcttacaatgagaggacagctctggttgcatccgag
ataccttctgtgccatcttaccaacaagaccctgaccaaccccagcctgcagacatggag
cccaggcgccgcccggtggccccagagcctgcagctgaaccccccagcctggacaggagt
gccgtggagcgggagcccgtagacctggaggaagaggaggagctcaccctcaagtacggc
gccaagcatgtcatcatgctgttcgtccccgtcaccctttgcatggtggtcgtcgtagcc
accatcaagtcggtcagcttctacactgagaagaatggacagcagctgatctacacgccg
ttcacagaggacacagacacagtgggcgagcggctgctcaactcggtgctcaacaccatc
atcatgatcagcgtcatcgtggtcatgaccatcttcttggtcgtgctctacaagtaccgc
tgctacaagttcattcatggatggctcatcctgtcctcgctgatgctgctcttctggttc
agcttcatgtacctgggggaggtatttaaaacctacaacttggccatggattaccccaca
gtagccatgatcatctggaactttggggcagtaggaatgatctgtatacactggaagggg
cctctgcagctgcagcaggcctacctcatcgccatctcggccctcatggccctggtgttc
atcaagtacctgcccgagtggtccgcctgggtcatcctgggagccatctccgtctacgat
ttggttgcggtcttgtgccctaaaggtcctctcaggatgcttgtagagaccgcacaggag
cgtaacgagcccatcttccctgctctcatatattcatctgccatgatatggatggttggg
atggccaacccagcaagaaatgcagagcccacaaatcaagatacagatgaggaggcacat
cagagtgagggcagtgccctggcgagagactgggtggagccagagactcaagtgtcctcc
gggatgaacaggtcctactcaactgaggatgacctagacgaggaagaccgaggagtcaag
ctgggactgggggacttcatcttctacagtgtgctggtggggaaggctgccgccaccgga
ggagactggaacaccacgctggcctgcttcgtggccattctcataggactctgccttact
cttctgctgctggccatattcaagaaggccctcccagctctccccatctccatcaccttt
ggcctggtcttctacttctctacagacaacctggtccgcccctttatggacaaccttgct
gcccaccagttctacatctga
DBGET
integrated database retrieval system