Streptomyces sp. VN1: EZV63_08605
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Entry
EZV63_08605 CDS
T10674
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
strv Streptomyces sp. VN1
Pathway
strv00300
Lysine biosynthesis
strv00550
Peptidoglycan biosynthesis
strv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
strv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EZV63_08605
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EZV63_08605
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
strv01011
]
EZV63_08605
Enzymes [BR:
strv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
EZV63_08605
Peptidoglycan biosynthesis and degradation proteins [BR:
strv01011
]
Precursor biosynthesis
Amino acid ligase
EZV63_08605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
QIP74901
LinkDB
All DBs
Position
complement(1928286..1929806)
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AA seq
506 aa
AA seq
DB search
MTYPGPPRPVRISATPLAELADQLGVTAPDSSAGVTGITHDSRAVRPGDLYAALPGARVH
GADFATQAAGLGAAAVLTDPAGAERVSAAGLPALVVDDPRARMGELAATIYGHPGRDLLQ
IGITGTSGKTTTAYLVEGGLRTEKSTGLIGTVEMRIGDERIKSERTTPEATDLQALFSVM
RERGTEAVAMEVSSHALVLGRVDACVFDVAVFTNLSPEHMEFHSGMEDYFQAKAQLFTPA
RSRLGVVNVDDEYGRRLAKEATVPVVTYSAEGHPDADWRADEVEVGPLDSTFTVLGPKGE
RIAAKSPLAGPFNVANTLAAIVSLAAAGLDPQTAADGVAAVPGVPGRLERVDEGQPFFAV
VDYAHKTDAVESVLRALRKVTEGKLHAVLGCGGDRDTTKREPMGAAVARFADTAVLTSDN
PRSEDPLAILAVMLQGAASVPAHERGEVQVFEDRAAAIAAAVARAEPGDTVVVAGKGHEQ
GQDIAGVVRPFDDREVLREAIQRSKA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgacctacccgggaccgccccggccggtgcggatctccgccacacccctcgcggaactc
gccgatcagctgggtgtcaccgcgccggacagctccgccggggtcacgggcatcacccat
gactcgcgcgccgtccgccccggtgacctgtacgccgccctccccggagcccgcgtccac
ggcgccgacttcgccacccaggccgcgggcctcggtgccgccgccgtgctgaccgacccg
gccggtgcggagcgcgtctccgccgccgggctgccggcgctcgtggtcgacgacccgcgc
gcgcggatgggcgagctggcggccacgatctacggccaccccggccgcgacctgctccag
atcggcatcaccggcacctcgggcaagaccaccaccgcctacctcgtcgagggcggtctg
cgtacggagaagtccaccggcctgatcggcacggtcgagatgcgcatcggcgacgagcgc
atcaagtccgagcggaccacgcccgaggccaccgacctccaggccctgttctcggtgatg
cgcgaacgcggcaccgaggcggtcgccatggaggtctccagccacgccctggtgctgggc
cgggtcgacgcctgcgtcttcgacgtcgcggtcttcaccaacctcagcccggagcacatg
gagttccactccggcatggaggactacttccaggccaaggcgcagctcttcacgcccgca
cgcagcaggctcggcgtggtcaacgtcgacgacgagtacgggcggcgcctcgccaaggag
gccaccgtcccggtcgtcacctactccgccgagggccacccggacgccgactggcgcgcc
gacgaggtcgaggtcggcccgctggactcgacgttcaccgtgctcgggccgaagggcgag
cggatcgccgccaagtcgccgctggccgggccgttcaacgtggcgaacaccctcgccgcg
atcgtctccctggccgccgccgggctcgacccgcagaccgccgccgacggcgtcgccgcc
gtccccggtgtgccgggccgcctggagcgcgtggacgagggccagcccttcttcgcggtg
gtcgactacgcccacaagaccgacgccgtcgagtcggtgctgcgggccctgcgcaaggtg
accgagggcaagctgcacgccgtgctcggctgcggcggcgaccgcgacaccaccaagcgc
gagccgatgggcgccgccgtcgcccggttcgccgacaccgccgtactgacctccgacaac
ccccgctccgaggacccgctcgcgattctcgccgtcatgctgcagggcgcggcctccgtg
cccgcgcacgagcgcggggaggtgcaggtcttcgaggaccgggccgccgcgatcgccgcc
gccgtcgcccgggccgagcccggcgacaccgtggtggtggcgggcaagggccacgaacag
ggccaggacatcgccggggtggtgcgccccttcgacgaccgcgaggtgctgcgcgaagcc
atccagaggtccaaggcctga
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