Streptomyces tsukubensis: B7R87_13530
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Entry
B7R87_13530 CDS
T07155
Name
(GenBank) chloramphenicol efflux pump
KO
K18553
MFS transporter, DHA1 family, chloramphenicol resistance protein
Organism
stsu
Streptomyces tsukubensis
Brite
KEGG Orthology (KO) [BR:
stsu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stsu02000
]
B7R87_13530
01504 Antimicrobial resistance genes [BR:
stsu01504
]
B7R87_13530
Transporters [BR:
stsu02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
B7R87_13530
Antimicrobial resistance genes [BR:
stsu01504
]
Gene variants
Phenicol resistance genes
Transporters
B7R87_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_4
Motif
Other DBs
NCBI-ProteinID:
AZK94770
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Position
3414009..3415238
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AA seq
409 aa
AA seq
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MPLAVYILGLSVFALGTSEFMLSGLLPPIADDMGVSIPQAGLLISAFAVGMVVGAPLLAV
ATLRLPRKATLIALISVFGLGQVAGALAPTYEILFASRVVSALACAGFWALGAAVAVAMV
PVNSRARAMAVMIGGLSIANVLGVPAGAFLGEHLGWRAAFWAVAVSSAVALVGVVTRIPS
IPVPAEKPQLKRELSIYRDGQVWLAVFTTALAGGGVFCAFSYFAPLITDVAGIGEGWVST
VLALFGIGALVGTTVGGRIADAHLFGVMISGIAASTVFLAALAVFAAVPAVVVTLAFLLG
VSAFYTAPALNARIFNVAGAAPTLAAATTTAAFNIGNTAGPWLGGTVIDADLGYESPAWA
GAAMLIVALALVTVSMRMQGRSKVVTGSAVTAAADEAARVPSPAVAERA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgcggtctacatcctcggactctcggtcttcgccctcggcaccagcgagttc
atgctctccggcctgctgccgcccatcgccgacgatatgggtgtgtcgatcccccaggcc
ggcctgctgatatccgccttcgcggtcggcatggtggtgggcgcgccgctgctcgcggtg
gccaccctcaggctcccccgcaaggccaccctgatcgccctgatctccgtcttcggcctg
ggtcaggtggcgggcgcgctcgccccgacgtacgagatcctcttcgcgtcccgcgtcgtc
agcgccctcgcctgcgccggtttctgggcgctcggcgcggccgtggcggtcgcgatggtg
ccggtgaactcccgggcccgggcgatggccgtgatgatcggcgggctgtcgatcgccaat
gtcctcggtgttccggcgggcgccttcctcggtgagcacctgggctggcgcgcggccttc
tgggcggtggccgtgtcgtcggcggtggcgctggtcggtgtggtgacccggatcccgagc
atcccggtgcccgccgagaagccgcagctcaagcgggagctgtcgatctaccgcgacggt
caggtgtggctggcggtcttcaccacggcgctcgcgggcggcggcgtgttctgcgccttc
tcgtacttcgccccgctgatcaccgatgtcgcgggcatcggtgagggctgggtgtcgacg
gtcctcgcgctcttcggtatcggtgctctcgtgggtacgacggtgggcggccggatcgcg
gacgcgcacctcttcggcgtgatgatcagcggtatcgcggcgtcgacggtcttcctggcg
gcgctggcggtcttcgcggcggttccggcggtggtcgtcacgctggcgttcctgctgggc
gtgtccgccttctacaccgccccggcgctcaacgcccgcatcttcaatgtggcgggtgcg
gccccgacgctcgcggcggccaccacgacggcggcgttcaacatcggcaacacggcgggc
ccgtggctcggcggcacggtcatcgacgcggacctcggctacgagtcccccgcctgggcg
ggagcggcgatgctgatcgtggcgctggcgctggtcacggtgtcgatgcggatgcagggc
cggtcgaaggtggtgacgggttcggcggtcaccgcggccgcggacgaggccgcccgggta
ccgtctccggcggtcgcggaacgggcctga
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