Salmonella enterica subsp. enterica serovar Typhi Ty2: t2014
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Entry
t2014 CDS
T00121
Symbol
ybjF
Name
(GenBank) hypothetical RNA methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stt03009
]
t2014 (ybjF)
Enzymes [BR:
stt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
t2014 (ybjF)
Ribosome biogenesis [BR:
stt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
t2014 (ybjF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_12
Methyltransf_15
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AAO69626
UniProt:
Q8Z841
LinkDB
All DBs
Position
complement(2072424..2073551)
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AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWITQSVNEQLSAKTADLHRLLAGLPVEQWCAPISGPEQHFRNKAK
MVVSGSVEKPLFGMLHRDGTPVDLCACPLYPASFAPVFSALKPFIARAGLTPYNVARKRG
ELKYLLLTESQFDGGMMLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIM
EGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLPVRHMWDL
FCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET
PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPNYRIQRVQLFDMF
PHTAHYEVLTLLCRL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactctatgacgcgggtcgctgccgttcctgtcaatggattacgcagtcg
gttaacgaacaactttccgcaaaaacagccgatttacatcgtttgctggccgggctgcct
gttgaacagtggtgcgcgccgattagcggcccggaacagcatttccgcaacaaagcgaaa
atggtcgtgagcggtagtgtagaaaaaccgctcttcgggatgctgcatcgcgacggtacg
ccggtcgatctttgcgcttgcccgctgtatcccgcctcctttgcccccgtattcagcgcg
ctaaaaccttttattgcccgtgccggactcacgccttataacgtggcgcgaaaacgcggc
gaactgaaatacctgttgctgacggaaagtcagttcgatggcggcatgatgctacgcttc
gtgttgcgttcagaaaccaaacttacgcaactgcgcgcggcgttaccgtggctgcgcgcg
caactgccgcagctcagagtgatcaccgcgaatatccagccggtacatatggcgattatg
gaaggggagacggaaatctatctgacggatcagcaggcgctggcggaacgttttaacgat
gtgccgctgtggattcgtccgcaaagtttctttcagaccaaccctacggtcgccagccga
ttatatgcgacggcgcgcgactgggtagggcaattgccggtacgccatatgtgggatctt
ttttgcggagtgggcggattcggcctgcactgcgcgacgccgcagatgcaattaaccggt
attgagatcgcgccggaggcgattgcctgcgcgaagcaatccgctgccgagctgggatta
acccgccttcatttccaggcgctggattccacccaattcgccaccgcacaaggcgaaacg
cccgatctggtgttggtgaatcctccccgccgcggcattggcaagccgttgtgcgattac
cttgcacaaatggcgccgcgttttatcatttattcgagctgtaacgcgcagacgatggcg
caggatattcgccatctgccgaactaccgtattcaacgtgttcagcttttcgatatgttc
ccccataccgcgcattatgaagtgttaacactgctttgcaggctgtag
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