Streptomyces sp. VB1: OH133_17510
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Entry
OH133_17510 CDS
T11054
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OH133_17510 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_17510 (nth)
Enzymes [BR:
stvb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OH133_17510 (nth)
DNA repair and recombination proteins [BR:
stvb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OH133_17510 (nth)
Prokaryotic type
OH133_17510 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UZI29778
LinkDB
All DBs
Position
complement(3874293..3875132)
Genome browser
AA seq
279 aa
AA seq
DB search
MPDQPGKSGKADKTAKGAAARKAPKAESHLAMVRRARRINRELAEVYPYAHPELDFRNPF
ELLVATVLSAQTTDLRVNQTTPALFAAYPTPEDMAAAVPEEMEEIIRPTGFFRAKTKSLL
GLSAALRDEFGGEVPGRLEDLVKLPGVGRKTANVVLGNAFGVPGITVDTHFGRLVRRWKW
TDEEDPVKVEAVVAGIFPKNEWTMLSHRVVFHGRRICHARKPACGACPIAPLCPSYGEGE
TDPEKAGKLLKYEMGGYPGQRLSPPADYPGKPAPALGAG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccaacccggcaaatctggcaaagccgacaaaacggccaagggtgccgcggcg
cgcaaggcgccgaaggcggagtcgcacctcgcgatggtccgccgggcgcgccggatcaac
cgcgagctcgccgaggtctacccgtacgcccatcccgagctggacttccgtaacccgttc
gagctcctcgtggccacggtcctctccgcccagaccacggacctgagggtcaaccagacc
acccccgcgctcttcgccgcctaccccacccccgaggacatggcggcggccgtgccggag
gaaatggaggagatcatccggccgaccgggttcttccgggccaagaccaagtcgctgctc
ggcctctcggccgccctccgggacgagttcggcggcgaggtcccggggcgcctggaggac
ctggtgaagctgcccggcgtcggccgcaagaccgccaacgtggtcctgggcaacgccttc
ggcgtccccggcatcaccgtcgacacgcacttcgggcgcctggtgcggcgctggaagtgg
accgacgaggaggacccggtgaaggtcgaggcggtcgtcgccgggatcttccccaagaac
gagtggacgatgctctcgcaccgggtggtgttccacggacgccggatctgccacgcccgc
aagcccgcctgcggcgcctgccccatcgccccgctctgtccttcgtacggagagggcgag
accgatccggagaaggccgggaagcttctcaagtacgagatgggcggttatccgggccag
cggctcagtccgcccgccgactacccgggaaagcccgcgcccgcgctcggggccgggtga
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