Subtercola endophyticus: LQ955_06980
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Entry
LQ955_06980 CDS
T08409
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
suba
Subtercola endophyticus
Pathway
suba00300
Lysine biosynthesis
suba00550
Peptidoglycan biosynthesis
suba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LQ955_06980
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQ955_06980
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
suba01011
]
LQ955_06980
Enzymes [BR:
suba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LQ955_06980
Peptidoglycan biosynthesis and degradation proteins [BR:
suba01011
]
Precursor biosynthesis
Amino acid ligase
LQ955_06980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF7302
Motif
Other DBs
NCBI-ProteinID:
UFS60477
LinkDB
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Position
complement(1474183..1475799)
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AA seq
538 aa
AA seq
DB search
MSASGQLNALRPAHPTARELTDLVSQFGLDVPNGRPGLDGLTITGITLSSKQVRPGDLYV
GLAGVRAHGAQFADEAKANGAVAIVTDARGEALAARSGLPVLVIDDPRASLGALSAWVYG
TADFAPTLFGVTGTNGKTSVSYILEAILRQLGILAGISTTAQRRIGDLAMTSALTTPEAT
EVHGLLALMREADADAVVIEVSAQALTRHRVDGIVFDVVGFTNLTHDHLDDYGTMQKYFE
AKTPLFQPDRARRGVVINDAEWGVRLARTAGIPVVTLSTYPGRPADWYAAILRETVDETR
FILSGPDDQNLTTSIPVLGRHMAENAALAIVMLVESGIPLADIKQALDRDGGIQVYIPGR
AERIANDGPAVFIDYGHSPDAFTSTLDSLRRVTDGRIIMLFGADGDRDPSKREEMGQIAA
RLSDAVVITDFHPRTEDPAAIRKVLVDAARAAVPEREVYEVGDPREAFRKALSLATPADA
ILYAGPGHEDYHEVSGEHLPYSARDDARLALHEFGWLPTVQDSPSVQHAQTAQESPHA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgagtggccagctgaacgccttgcggcctgcgcaccccaccgctagagagctc
accgacctggtgtcgcaattcggtctcgacgtgccgaacgggcgccccggtctcgacggg
ctcaccatcactggcatcacgctgtcgtcgaagcaggttcggcccggcgacctctacgtg
gggctcgccggtgtgcgggcgcacggcgcgcagttcgccgacgaagcgaaggccaacggc
gctgtcgccatcgtgacggatgcccgtggcgaggccctcgcggcccgcagcgggctgccc
gtgctggtcatcgacgacccccgcgcatccctcggcgcgctctctgcctgggtgtacggc
actgctgacttcgcgccgacgctcttcggagtcaccggaaccaacggcaagaccagcgtc
tcgtacattctcgaagcgattctgcgtcagctgggcattctcgccggcatcagtacgacg
gcccagcgccgcatcggcgacctggccatgacgagtgctctcaccactcccgaagccacc
gaggtgcacggcctgctcgctctgatgcgcgaggccgacgctgacgcggtggtcatcgaa
gtctcggctcaggcgctcacccgccaccgggtcgacggaatcgtgttcgacgtggtgggt
ttcacgaatctcacccacgatcacctcgacgactacggcaccatgcagaagtacttcgag
gccaagaccccgctgttccagcccgatcgagcccgtcgcggggtcgtcatcaacgacgcc
gagtggggggtgcgccttgcgcgcaccgccggcattccggtggtcaccctgtcgacctac
cccggtcgccctgccgactggtacgccgcgattctgcgcgagaccgtcgatgagacccgg
ttcattctgagcgggccggatgaccagaacctcaccacctcgattccggtactcggccgg
cacatggccgagaacgcagcccttgccattgtgatgctggtggagtcgggcatcccgctc
gccgacatcaagcaggcgctcgaccgcgacggcggaattcaggtctacattccggggcgc
gccgaacgcattgcgaacgacgggccggccgtgttcatcgactacgggcacagccccgat
gccttcaccagcacgctcgactcgctgcggcgggtcaccgacggccgcatcatcatgctg
ttcggggccgacggcgaccgcgacccgagcaagcgcgaagagatgggccagatcgccgcc
cggctctccgacgccgtggtgatcaccgatttccatccgcgcaccgaagacccggcggct
attcgcaaggtgcttgtcgacgcggcacgagccgccgtgcccgagcgcgaggtctacgag
gtcggcgacccgcgggaagcgtttcgaaaggcgctcagcctggcgacgcccgccgacgcg
attctctatgcgggcccggggcacgaggattaccacgaggtcagcggcgaacacctccct
tattcggccagagacgatgcgcggctcgcgctgcacgaattcggctggctcccaacagtg
caagactcacccagcgtgcagcacgcacagacagcgcaggaatcaccccatgcttga
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