Staphylococcus aureus subsp. aureus LGA251 (MRSA): SARLGA251_17890
Help
Entry
SARLGA251_17890 CDS
T02085
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
suf
Staphylococcus aureus subsp. aureus LGA251 (MRSA)
Pathway
suf03030
DNA replication
suf03410
Base excision repair
suf03420
Nucleotide excision repair
suf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
suf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SARLGA251_17890 (lig)
03410 Base excision repair
SARLGA251_17890 (lig)
03420 Nucleotide excision repair
SARLGA251_17890 (lig)
03430 Mismatch repair
SARLGA251_17890 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suf03032
]
SARLGA251_17890 (lig)
03400 DNA repair and recombination proteins [BR:
suf03400
]
SARLGA251_17890 (lig)
Enzymes [BR:
suf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SARLGA251_17890 (lig)
DNA replication proteins [BR:
suf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SARLGA251_17890 (lig)
DNA repair and recombination proteins [BR:
suf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SARLGA251_17890 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SARLGA251_17890 (lig)
MMR (mismatch excision repair)
DNA ligase
SARLGA251_17890 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SARLGA251_17890 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
RNA_pol_A_CTD
PTCB-BRCT
Nlig-Ia
Zn_ribbon_NUD
HHH
zf-IS66
DUF7575
TPR_ZFYVE26
Motif
Other DBs
NCBI-ProteinID:
CCC88554
LinkDB
All DBs
Position
complement(1987150..1989153)
Genome browser
AA seq
667 aa
AA seq
DB search
MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTV
RVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGNVEYMCELKIDGLAVSL
KYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPLNVEVRGEAYMPRRSFLRLNE
EKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDLTDFNARSQSEALDELD
KLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSP
RWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHNEDLIHDR
DIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEGEVALRCI
NPKCQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEEDLLPLDRM
GQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAELVE
IHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNMIYKGIKTSDIEGHPEFSGKTIVLTG
KLHQMTRNEASKWLASQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGIEIWTEQQFVD
KQNELNS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttatcgtctcgtgtgaacgagttacatgatttattaaatcaatacagttat
gaatactatgtagaggataatccatctgtaccagatagtgaatatgacaaattacttcat
gaactgattaaaatagaagaggagcatcctgagtataagactgtagattctccaacagtt
agagttggcggtgaagcccaagcctctttcaataaagtcaaccatgacacgccaatgtta
agtttagggaatgcatttaatgaggatgatttgagaaaattcgaccaacgcatacgtgaa
caaattggcaacgttgaatatatgtgcgaattaaaaattgatggcttagcagtatcattg
aaatatgttgatggatacttcgttcaaggtttaacacgtggtgatggaacaacaggtgaa
gatattaccgaaaatttaaaaacaattcatgcgatacctttgaaaatgaaagaaccatta
aatgtagaagttcgtggtgaagcatatatgccgagacgttcatttttacgattaaatgaa
gaaaaagaaaaaaatgatgagcagttatttgcaaatccaagaaacgctgctgcgggatca
ttaagacagttagattctaaattaacggcaaaacgaaagctaagcgtatttatatatagt
gtcaatgatttgactgatttcaatgcgcgttcgcaaagtgaagcattagatgagttagat
aaattaggttttacaacgaataaaaatagagcgcgtgtaaataatatcgatggtgtttta
gagtatattgaaaaatggacaagccaaagagagtcattaccttatgatattgatgggatt
gttattaaggttaatgatttagatcaacaggatgagatgggattcacacaaaaatctcct
agatgggccattgcttataaatttccagctgaggaagtagtaactaaattattagatatt
gaattaagtattggacgtacaggtgtagtcacacctactgctattttagaaccagtaaaa
gtagctggtacaactgtatcaagagcatctttgcacaatgaagatttaattcatgacaga
gatattcgaattggtgatagtgttgtagtgaaaaaagcaggtgacatcatacctgaagtt
gtacgtagtattccagaacgtagacctgaagatgctgtcacatatcatatgccaacccat
tgtccaagttgcggacatgaattagtacgtattgaaggcgaagtagcacttcgttgcatt
aatccaaaatgccaagcacaacttgttgaaggattgattcactttgtatcaagacaagcc
atgaatattgatggactaggcactaaaattattcaacagctttatcaaagcgaattaatt
aaagatgttgctgatattttctatttaacagaagaagatttattacctttagatagaatg
gggcagaaaaaagttgataatttattagctgccattcaacaagctaaggacaattcttta
gaaaatttattatttggtctaggtattaggcatttaggtgttaaagcgagccaagtgtta
gcagaaaaatatgaaacgatagatcgattactaacggtaactgaagcggaattagtagaa
attcatgatataggcgataaagtagcacaatctgtagttacttacttagaaaatgaagat
attcgtgctttaattcaaaaattaaaagataaacatgttaatatgatttataaaggtatc
aaaacatcagatattgaaggacatcctgaatttagtggtaaaacgatagtactaactggt
aagctacatcaaatgacacgcaatgaagcatctaaatggcttgcatcacaaggtgctaaa
gttacaagtagcgttactaaaaatacagatgtcgttattgctggtgaagatgcaggttca
aaattaacaaaagcacaaagtttaggtattgaaatttggacagagcaacaatttgtagat
aagcaaaatgaattaaatagttag
DBGET
integrated database retrieval system
