Sphingobium fuliginis ATCC 27551: FIL70_08950
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Entry
FIL70_08950 CDS
T06343
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sufl
Sphingobium fuliginis ATCC 27551
Pathway
sufl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sufl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIL70_08950 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sufl03400
]
FIL70_08950 (nth)
Enzymes [BR:
sufl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FIL70_08950 (nth)
DNA repair and recombination proteins [BR:
sufl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIL70_08950 (nth)
Prokaryotic type
FIL70_08950 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDC37329
UniProt:
A0A5B8CDQ6
LinkDB
All DBs
Position
cSF1:1889699..1890349
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AA seq
216 aa
AA seq
DB search
MKKDQIFDFFSRLAEANPAPRTELEYGNVYQLLVAVVLSAQATDVGVNKATRALFRDVHT
PQQMVELGEEGLKQHIKTIGLFNAKAKNVIALSEILLRDFGGEVPQDRDVLTTLPGVGRK
TANVVVNTAFGQETFAVDTHIFRVGNRTGLAPGKTPLAVELKLEKNVPGPFRRDAHHWLI
LHGRYVCKARKPECWRCIVADLCRFKPKTPAPGAGH
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggaccagatcttcgatttcttcagccgcctcgctgaagccaatccggcgccc
cgaacggagctggaatatggcaatgtctatcagttgctggtcgcggtggtgctttccgcg
caggcgacggacgtgggcgtcaacaaggcgacccgcgcgctcttccgcgacgtccacacg
ccacagcagatggtggaactgggcgaagaaggcctgaagcagcatatcaagaccatcggc
ctcttcaacgccaaggcgaagaacgtcatcgccctgtccgaaatcctcctgcgcgatttc
ggcggagaagtgccgcaggatcgcgatgtcctgaccaccctgcccggcgtcgggcgaaag
accgccaatgtcgtggtcaacaccgcgttcgggcaggaaacattcgcagtcgacacccac
atcttccgtgtcggcaatcgtaccggcctcgcgccgggcaagacgccgcttgccgtcgaa
ctgaagctcgagaaaaacgttcccggccccttccgccgcgatgcccatcactggctgatc
ctgcatggccgctatgtctgcaaggcgcgaaagcccgaatgctggcgctgcatcgtggcc
gacctctgccgcttcaagcccaagacgcccgcgcccggcgccggccactga
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