Staphylococcus aureus subsp. aureus ST398 (MRSA): SAPIG1998
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Entry
SAPIG1998 CDS
T02071
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sug
Staphylococcus aureus subsp. aureus ST398 (MRSA)
Pathway
sug03030
DNA replication
sug03410
Base excision repair
sug03420
Nucleotide excision repair
sug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAPIG1998 (ligA)
03410 Base excision repair
SAPIG1998 (ligA)
03420 Nucleotide excision repair
SAPIG1998 (ligA)
03430 Mismatch repair
SAPIG1998 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sug03032
]
SAPIG1998 (ligA)
03400 DNA repair and recombination proteins [BR:
sug03400
]
SAPIG1998 (ligA)
Enzymes [BR:
sug01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SAPIG1998 (ligA)
DNA replication proteins [BR:
sug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SAPIG1998 (ligA)
DNA repair and recombination proteins [BR:
sug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SAPIG1998 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAPIG1998 (ligA)
MMR (mismatch excision repair)
DNA ligase
SAPIG1998 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAPIG1998 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
RNA_pol_A_CTD
Zn_ribbon_NUD
HHH
zf-IS66
DUF7575
Motif
Other DBs
NCBI-ProteinID:
CAQ50386
LinkDB
All DBs
Position
complement(2073760..2075763)
Genome browser
AA seq
667 aa
AA seq
DB search
MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTV
RVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGNVEYMCELKIDGLAVSL
KYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPLNVEVRGEAYMPRRSFLRLNE
EKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELD
KLGFTTNKNRARVSDIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSP
RWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHNEDLIHDR
DIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEGEVALRCI
NPKCQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEEDLLPLDRM
GQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAELVE
IHDIGDKVAQSVVTYLENEDIRALIQKLKYKHVNMIYKGIKTSDIEGHPEFSGKTIVLTG
KLHQMTRNEASKWLTSQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGIEIWTEQQFVD
KQNELNS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttatcgtctcgtgtgaacgagttacatgatttattaaatcaatacagttat
gaatactatgtagaggataatccatctgtaccagacagtgaatatgacaaattacttcat
gaactgattaaaatagaagaggagcatcctgagtataagactgtagattctccaacagtt
agagttggcggtgaagcccaagcctctttcaataaagtcaaccatgacacgccaatgtta
agtttagggaatgcatttaatgaggatgatttgagaaaattcgaccaacgcatacgtgaa
caaattggcaacgttgaatatatgtgcgaattaaaaattgatggcttagcagtatcattg
aaatatgttgatggatacttcgttcaaggtttaacacgtggtgatggaacaacaggtgaa
gatattaccgaaaatttaaaaacaattcatgcgatacctttgaaaatgaaagaaccatta
aatgtagaagttcgtggtgaagcatatatgccgagacgttcatttttacgattaaatgaa
gaaaaagaaaaaaatgatgagcagttatttgcaaatccaagaaacgcagctgcggggtca
ttaagacagttagattctaaattaacggcaaaacgaaagctaagcgtatttatatatagt
gtcaatgatttcaccgatttcaatgcgcgttcgcaaagtgaagcattagatgagttagat
aaattaggttttacaacgaataaaaatagagcgcgcgtcagcgatatcgatggcgtttta
gaatatattgaaaaatggacaagccaaagggaatcattgccatacgatatcgatggtatt
gtgataaaggttaatgatttagatcagcaggacgaaatgggattcacacaaaaatcacca
agatgggccattgcttataaattcccagctgaggaagtggtaactaaattattagatatt
gaattaagtattggacgtacaggtgtagtcacacctactgctattttagaaccagtaaaa
gtagctggtacaactgtatcaagagcatccttgcacaatgaagatttaattcatgacaga
gatattcgaattggtgatagtgttgtagtgaaaaaagcaggtgacatcatacctgaagtt
gtacgtagtattccagaacgtagacctgaggatgctgtcacatatcatatgccaacccat
tgtccaagttgtggacatgaattagtacgtattgaaggcgaagtagcacttcgttgcatt
aatccaaaatgccaagcacaacttgttgaaggattgattcactttgtatcaagacaagcc
atgaatattgatggtttaggcactaaaattattcaacagctttatcaaagcgaattaatt
aaagatgttgctgatattttctatttaacagaagaagatttattacctttagacagaatg
gggcagaaaaaagttgataatttattagctgccattcaacaagcaaaggacaactcttta
gaaaatttattattcggtctaggtattaggcatttaggtgttaaagcgagccaagtgtta
gcagaaaaatatgaaacgatagatcgattactaacagtaactgaagcggaattagtagaa
attcatgatataggtgataaagtagcacaatctgtagttacttatttagaaaatgaagat
attcgtgctttaattcaaaaattaaaatataaacatgttaatatgatttataaaggtatc
aaaacatcagatattgaaggacatcctgaatttagtggtaaaacgatagtactgactggt
aagctacatcaaatgacacgcaatgaagcatctaaatggcttacatcacaaggtgctaaa
gttacaagtagcgttactaaaaatacagatgtcgttattgctggtgaagatgcaggttca
aaattaacaaaagcacaaagtttaggtattgaaatttggacagagcaacaatttgtagat
aagcaaaatgaattaaatagttag
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