Sulfitobacter sp. CB2047: IV89_003079
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Entry
IV89_003079 CDS
T10375
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sulb Sulfitobacter sp. CB2047
Pathway
sulb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sulb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IV89_003079 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulb03400
]
IV89_003079 (nth)
Enzymes [BR:
sulb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IV89_003079 (nth)
DNA repair and recombination proteins [BR:
sulb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IV89_003079 (nth)
Prokaryotic type
IV89_003079 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ULO20010
LinkDB
All DBs
Position
3125197..3125841
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AA seq
214 aa
AA seq
DB search
MAKTLDYHTIREIFTRFQDAEAEPKGELDHTNVYTLLVAVALSAQATDAGVNKATKSLFE
IVEHPQQMLDLGLEGLTEHIKTIGLFRQKAKNVMKLSQILVDDYDGVVPNSRAALQSLPG
VGRKTANVVLNMWWHYPAQAVDTHIFRVGNRTRIAPGKTVDTVERAIEDNIPVDFQHHAH
HWMILHGRYHCKARKPLCRTCIIRDLCPYEEKTE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaacccttgattatcacacgatccgcgagattttcacccgctttcaggacgcc
gaggcggaaccgaaaggcgagctggatcacaccaacgtctatacgttgctggtcgctgtc
gcgctgagcgcgcaggccacggatgcgggggtaaacaaggctaccaaatccctgttcgag
atcgtcgagcacccgcagcagatgctggacctcgggctggaagggctgaccgaacatatc
aagacgatcggcctgttccgccagaaggccaagaacgtgatgaagctgagccagattctg
gtggatgactatgacggggtcgtacccaacagccgcgcggcgctgcaatcattgcccggc
gtgggccgcaagacggcgaatgttgtgctgaacatgtggtggcactatccggcgcaggcg
gtggacacgcatatctttcgcgtcggcaatcgcacacgcatcgcccccggcaaaaccgtc
gataccgtagaacgcgcgatcgaggataatatccctgtcgatttccaacaccatgcccac
cactggatgatcctgcacgggcgataccattgcaaagcacgcaaacccctatgcagaacc
tgcatcatccgtgacctttgcccctatgaggaaaaaaccgaatga
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