Sceloporus undulatus (fence lizard): 121917290
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Entry
121917290 CDS
T07740
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121917290
03400 DNA repair and recombination proteins [BR:
sund03400
]
121917290
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121917290
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
121917290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
HATPase_c
Nmad5
Motif
Other DBs
NCBI-GeneID:
121917290
NCBI-ProteinID:
XP_042299038
LinkDB
All DBs
Position
Unknown
AA seq
1767 aa
AA seq
DB search
MAAEGSDSEDDGSGRKVLTLFVYDRRRDCSDDDEKLLECRESYGGFRSAVCQVFGISSEE
TFVITTTNRKEITVENFGDMVKDKMTCYLLHSVDQLLPSATKERIDFLPHYDTLVKSGMY
EYYASEGQNPLPFALAELIDNSLSATSQNSGVRSIQLKLLFDDTQGKPAIAVVDNGRGMT
SKQLNNWAVYRLSKFTRQGDMESFDISDHSGYVRPPIVPRSLNSDISYFGVGGKQAVFFI
GQSARMISKPAGSQDVHELVLSKEDFEKKEKNKESVYSGYIRNRKPRDSSHIVNDDERFL
HNLIMEEKDKTGFTAVVITGVQPEHVHYLKNNFHLWMRQLTHIYHYYIYGPKGNETNLPK
KEGRPFNNIDIEISIFEKGKTPKIMNLREIKDDMQTLYINTAADSFEFKAHVEGDGIVEG
IIRYHPFLYDKETYPEDPCFPSRVKDDDEEEDEDDEAECFAVEKRARGKRPIFECFWNGR
LIPYTTVEEFEWCALPKKRGLTPIECYKRISGVLFTNDKFQVSTNKLTFMDLELKLKDKN
TLFTRIVNGQEQRMKIDKEFALWLKECHEKYDKQIKFTLFREIVTRPEVTSKRKQRPWAT
YSAIEWDGKTYKVGQLVKSTKTVPIYHGSIRNFFLYGNHDGDVYAPGGFVQLALEPQALY
DEIKVIPIHKLDCSASDKAVKKYIEEEMARLPDRLSVTWPEGDELLPDETKLAGATIGAL
KIEILNKKGEAMQKLPGSRHGGSKKLLVELKVILHAPSGNKEIISHISQHGSKWPFWFKK
MENINKLGAYTLKLQVVLNESNADTYAGRSLPSKTFKFNIIEGKPQKFSIGLLDPPFRVG
LPFSIPLDVQDEFGHSTYLTDDIIPVLEASGLTLQYEEVERRPNCTVKGITARGLVSSLQ
GKNFTLKISLPGLKEESQLLKIKLLPGPPRQLKVKPDSDILKIENGTAFPFHVEVLDEVG
NLTAQPKLIVHCKFSGAPDLPVYAVDCSSAGSNILTGPVLHIQNIKKDQILKARIEIPSC
KNVPPLEKTIKMLPSSRVAKLHIFSVGGEKAIQIKHRDEINWIAGDMMQNLIFQMYDEGE
REIIVTPTLAEKIKVNWTPKINREQLLNGMLPDVKVPTSVKDLRYCQVTFHDEHVSLESD
FTVRPLADDPKHIKCKLKGSNILQMGETLQSEIEVMITDQHGNHIQTLPSSCVTSFGISG
NDLDRSELKTMWQEDTQTFRVTGIRFKPCAPGIKELCFAWREFSHFVRLKLVAGPPAKLM
LVDWTALEEPLSVINGKELHKPLIVQVCDEWNNPSSEPNVKISLLKPTSVKMTPSNLLLK
TDENGRANFGVITIHAPRGEYTLQFKASYYKNTLNCPIIKLNVLPDPEKPICLNVKYDKD
ATFTAGNTFPDFMVSVISEDGNIIVSVNPGRICMKMWKGHSSGALSQNVTTFGCTKTKDK
DDGFFYFRNKIVPEKVGPYSIQFMFAIDKINVLNSEQIIIEVVPNEPTQLMPRTLPNTPA
VSNVRAVGSRTLVKDLTLIIMDEYKNSTGNDLDGKIIAKIKSLIEKDTDIPLFHGKTSAV
EFPFHRGVAEIEDLVLAENSPGKDSTEYILEFQPVIPTLKRHLKPYCLPFFFYNGYKRQQ
QMATLTKEKDRLSQSINAYRNLFDTTNQLLDELKCQVQEAKIKEAQLKDDLKRHHQIDIP
HAEGLQYLDCLIKQKKSEQEGIMKQPRRTCTLSNYPKGSQDVLGKHDTPASCARTLLISP
VCVSQRPWGKGTGCIPVTVVLTYTGHL
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagggaagtgacagcgaggacgatggcagcggccgcaaagtgctaaccctc
ttcgtgtacgatcgacgccgagactgctccgacgacgacgagaaacttctagaatgtcgg
gagagctacggcggcttccgtagcgccgtctgtcaggtgtttggcatttcttctgaagaa
acttttgttatcacaacaactaacagaaaagagatcacagttgaaaactttggtgatatg
gttaaggacaagatgacttgttacctgcttcactctgttgatcagttgctcccctcagca
acaaaggaacgtattgatttccttccacattatgacacacttgtgaaaagtggaatgtat
gagtattatgctagtgaaggacaaaatcctctgccatttgctcttgcagaattaattgat
aactcactgtcagctacttctcaaaattccggtgtccggagcatacagttaaagctgttg
ttcgatgatacccagggaaagccagctattgctgttgttgataatggaagaggcatgact
tctaaacaacttaataactgggctgtgtatcgattgtcaaagtttacacgacaaggtgat
atggaaagttttgacattagtgatcattcaggatatgtacgtcctccaattgtacctcgc
agtttaaacagtgatatatcatattttggggttggtggtaaacaagctgtgttttttatt
ggacaatctgccagaatgatcagcaaacctgcaggttctcaggatgttcatgagcttgtt
ctttctaaagaagattttgaaaagaaagagaaaaacaaagaatctgtgtacagcggctac
attagaaacagaaagccacgtgactcttctcatattgttaacgatgatgaacgatttctg
cacaatcttatcatggaagaaaaagacaaaacaggtttcactgcagtggttattactggt
gtacagccagaacatgtgcactacttaaaaaataattttcatctttggatgagacaactg
acacacatatatcattactatatctatggtccaaaaggaaatgaaactaatttgccaaag
aaagagggaagacctttcaacaatattgatattgagatttcaatatttgaaaaagggaaa
acacccaagattatgaatcttagagaaatcaaagatgatatgcagaccttatatataaac
acagcagcggatagttttgagttcaaggctcatgttgaaggagatggtatagtagaggga
attatacgttatcatcctttcttgtatgataaagaaacttaccctgaagatccttgcttt
ccttcaagagtaaaagatgatgatgaagaagaagatgaagatgatgaagcagaatgtttt
gcagtagaaaagagagccagaggcaaaagacctatttttgaatgtttttggaatggaaga
ctaataccatatacaacagtggaagaatttgagtggtgtgctcttcccaagaagaggggg
cttacccccattgaatgttacaagagaatttctggtgtattatttacaaatgacaaattt
caagtcagcaccaacaaattgactttcatggatttggagttaaagttaaaagacaaaaat
acactttttacaagaatcgtcaatggacaggagcaaagaatgaaaatagacaaagaattt
gcattatggctcaaggaatgccatgaaaaatatgacaagcaaataaaatttactctgttc
agagaaatagttacgcgacctgaagtgacttccaaaagaaagcagcgtccctgggctaca
tactcagcgatagaatgggacggaaaaacgtataaagttggacagctagtaaaatcaact
aaaacagttccaatataccatggaagtataaggaatttttttctatatggaaatcatgat
ggagatgtatatgctccaggaggatttgttcagttagccctggaaccccaggcactatat
gatgaaataaaagttattccaatacacaaactcgattgttcagcatctgacaaagcagtc
aaaaaatacatagaagaagaaatggccaggctgcctgataggctgtcagtaacatggcct
gaaggagatgaattgttaccagatgaaacaaaacttgctggagctactataggtgcacta
aaaattgaaatactgaataaaaagggagaggctatgcaaaaacttcctggttcaaggcat
ggtggatcaaagaaattgcttgtggaattaaaggttatcttgcatgcccctagtggaaat
aaggaaatcatttctcatatcagtcaacatgggagtaaatggccattctggttcaaaaaa
atggaaaatattaataaacttggagcctacacgctgaaacttcaagtggtgttgaatgaa
agcaatgcagacacttacgcaggaagatctcttccatctaaaacttttaaatttaatata
atagagggcaagcctcagaagttttcaattggtcttctggatcctccatttagggttggg
cttccattcagtattcctctagatgtccaggatgaatttggtcattctacttatctgaca
gatgatattataccagtcctagaagccagtggtttaacattacaatatgaagaagtagaa
agaagaccaaattgtactgttaaaggaataactgctagaggccttgtgagcagtttgcag
ggaaagaactttactttgaagatcagtcttcctggactgaaggaagaatcccagcttttg
aaaattaaacttctcccaggtccccctcggcaattaaaagtcaagccagattctgatatc
ttgaagattgagaatggaacagcatttccatttcatgttgaagtgctggatgaagtagga
aacctaacagcacagcccaaactaattgtccattgcaagttttcaggcgctcccgacctt
cctgtgtatgccgtggactgcagcagtgcaggatcaaatatcttaacaggaccagttctg
catatacagaatataaagaaggaccagatacttaaagcaaggattgaaatacctagttgt
aaaaatgtgccaccattggagaagactattaaaatgcttcccagtagccgtgttgcaaaa
ctacatatatttagtgttgggggagaaaaagctattcagatcaagcaccgggatgaaatt
aactggattgcaggtgacatgatgcaaaatcttattttccaaatgtatgatgagggggaa
agagagatcatagtaactccaactctggccgaaaagattaaggtaaattggaccccaaag
attaatagagaacaattgcttaatggtatgttacctgatgtgaaagtgccaacgtctgta
aaagatctccgctattgccaagttacatttcatgatgaacatgtatctttggaaagtgat
tttacagtcagaccacttgctgatgatccgaaacatataaaatgcaaactaaaaggatca
aatatattacagatgggtgaaacactacaaagtgaaatagaggtgatgattacagatcag
cacggaaatcacattcagaccctaccatcatcttgtgtgacttcttttggaatttctgga
aatgatctggataggtcagaactgaaaactatgtggcaggaagatacccaaacttttcgt
gtcacaggcatcaggtttaagccatgtgcacctggaatcaaagagttatgctttgcttgg
cgtgaattttctcattttgtgagattaaaattggtggcaggacctccagccaaactgatg
cttgtagactggacagcgttggaagaacctctgtcagtgattaatggcaaagaattacac
aaacctcttatagtccaggtctgtgatgagtggaataacccatcttctgaacctaatgtc
aaaatcagccttttgaaacctacaagtgtaaagatgactccttcaaatctgcttcttaaa
acagatgaaaatggtagagcaaattttggagtcattactattcatgctcctaggggagaa
tatacattgcagtttaaagcctcatactacaaaaacacattgaattgcccaataattaaa
ttaaatgttctgcctgatcccgagaaacctatatgtttgaatgtcaagtatgacaaggat
gccacctttacagctggaaacacctttcctgacttcatggttagtgttatttctgaagat
ggcaatattattgtaagcgtaaatccaggaagaatttgcatgaaaatgtggaaaggacac
agtagtggtgctttatcacaaaatgttacaacatttggctgtaccaaaacaaaagataag
gatgacggctttttctacttcaggaacaaaattgttccagagaaagtgggtccatacagc
atccagtttatgtttgcaatcgacaaaataaatgttcttaacagtgaacagattataatt
gaagtagtgcctaatgaaccaacacagctgatgccaagaactttgccaaatactcctgct
gtttctaatgttcgggctgttggcagtcggactcttgtcaaggatttgaccctcattata
atggatgaatacaaaaactctactggaaatgatttagatggaaaaataatagctaaaatt
aaaagtttgattgagaaagatacagacatccccttgttccatgggaaaacaagtgcagtt
gagtttccttttcatagaggagttgctgaaattgaggatcttgtgctagcagaaaatagt
ccaggaaaagatagtactgaatatattcttgaatttcagccagtaataccaactttgaaa
agacatttgaagccttattgcctgccttttttcttttacaatggatataaaaggcaacag
cagatggcaacacttactaaagagaaagacaggctctctcaatcaataaatgcatataga
aatttgtttgacaccaccaatcagcttcttgatgaattaaagtgtcaagtccaggaagct
aaaataaaagaggctcaactgaaggatgatctgaaaagacaccaccagattgacatacct
catgctgaggggctgcagtatcttgattgtcttataaagcagaaaaagtctgagcaggaa
ggaataatgaaacaacctagaagaacatgcacacttagcaattatcccaaaggtagtcaa
gatgtgctgggcaaacatgacactcctgcgagctgtgcaagaaccttactaatctcccca
gtgtgtgtatcacagagaccatggggaaaaggaacaggttgcatacctgtaactgtggtt
cttacatacactggtcatctgtga
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