Sceloporus undulatus (fence lizard): 121923103
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Entry
121923103 CDS
T07740
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04010
MAPK signaling pathway
sund04020
Calcium signaling pathway
sund04510
Focal adhesion
sund04540
Gap junction
sund04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121923103 (PDGFRB)
04020 Calcium signaling pathway
121923103 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121923103 (PDGFRB)
04540 Gap junction
121923103 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
121923103 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sund01001
]
121923103 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sund04090
]
121923103 (PDGFRB)
Enzymes [BR:
sund01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121923103 (PDGFRB)
Protein kinases [BR:
sund01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121923103 (PDGFRB)
CD molecules [BR:
sund04090
]
Proteins
121923103 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
C2-set_2
VEGFR1-3_N_Ig-like
Adeno_E3_CR1
VEGFR-1-like_Ig-like
V-set
TM_ErbB1
HEF_HK
Motif
Other DBs
NCBI-GeneID:
121923103
NCBI-ProteinID:
XP_042309160
LinkDB
All DBs
Position
2:91823880..91945396
Genome browser
AA seq
1068 aa
AA seq
DB search
MLISLFLFITGLLRISSLEISPKDHEVILSLYSDFTLTCSGQNEVFWRKDGKHDIVDAIL
EEKGGTFFSTLTLRNVTGFYTGEYSCNYAQSSEGKAIYIFVPDPSLPFLPSTQEDVFVFS
TGHGEDIIPCRVTDPNTTVNLYEKKVNDPLLGTYYPQQGFKGYFEDTTYTCRATIDEQEF
DSESYYVYSIQVSSSPTSTINISISALQTVVKHGENISVTCAVRGIELINYTWSYPGQKV
GKMVEPVTDFVAGIRHYSNSTLTIHNAELGDEGLYVCEATDTYHGQKETQDIYIRVIDHG
FVTFHTVMNDTVFAELHKSHIFHVQIEAYPSPTITWFQNNQPLNSGSNSEFAITSKNLSE
TRYQTILTLVRVKQSEGGLYTVRAFHNDDSKDLSFYLQINVPAKVTDLRENSNTTSGEQT
VTCITEGMPQPEITWYTCNDIKRCDGGATKILGNTSEDMNLQTNSTYRDDLKIYIVTSKL
HLHRVDEPVFISCDSKNLLGTDSQNITLVPHNLSFKVIIISVILALLVLMVLFLVILIIL
WRKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGRTLGSGAFGRVV
EAIAHSLSHSQSTMRVAVKMLKSTARTSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG
PVYIITEYCRYGDLVDYLHRNKHTFLQCCTEKAKQETEVYGNAPNETRVQSHTSLSVESD
GGYMDMSKDESLDYVPMSDMKGEIKYVDIDSSNYGATYELGTYSPAVSEKVTLINESPIL
SYTDLVGVSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYI
SKGNTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK
RGYRMSKPTHASNEIYEIMQKCWEEKFEIRPSFSQLVVLLGNLLTDTYKKRYQQVSEEFL
KSDHPAVLRTRPRNMGLNNSSSTANSNASSSYVLYTAVEQNELDNDYIIPLPDPKPEGAS
DNPQEASSSRASSTLNEANTSSTLSCDSPLSQQQDQEEQEEQELKPEC
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctccttgttcctctttatcacaggattgttaagaatcagctctttggagatc
tctcctaaggaccatgaagtcatccttagtctctacagtgattttactctgacgtgttct
gggcagaatgaggttttctggagaaaggatggcaaacatgacatagtagacgctatccta
gaggaaaagggtggcactttttttagcacgctaacactaaggaacgtgactggattctac
acgggcgagtattcctgtaattatgctcagtcttcagagggaaaagccatctacattttt
gtaccagacccctcattgccattcctgccaagcacacaggaagatgtatttgtttttagc
actggccatggggaggacattattccatgtcgtgtgacagaccccaacactacagtgaat
ctatatgaaaagaaggttaatgacccactccttggcacttattacccacaacagggcttt
aagggatactttgaagacacaacctacacctgcagggcaaccatagatgagcaggagttt
gattctgaatcatactatgtctatagtatccaagtttcttcttcacctacctccactatc
aacatttctatcagtgcattgcaaactgttgtgaagcacggtgaaaatatatctgtcaca
tgtgcagtgagaggtatcgaactgataaattacacctggagctacccaggccaaaaagta
ggcaagatggttgaaccagtgacagattttgtagcagggatccgccactattctaattcc
acgctaaccatccacaatgctgagctgggagatgaagggctgtatgtttgtgaggccact
gatacctatcatgggcaaaaagaaacacaagacatctatatcagagtgattgatcatgga
tttgtgactttccacactgttatgaatgacactgtgtttgctgaactgcacaagagccac
attttccatgtgcagattgaggcctatccaagcccaacaatcacctggtttcagaataat
caacctctgaactcagggagcaacagtgagtttgccatcaccagcaagaatttgtcggaa
accaggtatcaaaccattctaaccctcgtaagagtgaaacagagtgaaggaggcttatac
actgtccgagctttccataatgatgactcgaaggacctgtccttttacttgcagattaat
gtcccagctaaagtgacagacctgagagaaaacagcaacaccaccagtggggagcaaaca
gtgacctgtattacagaaggaatgccccagccagagattacgtggtatacctgtaacgat
ataaaacggtgtgatgggggagccaccaaaatcctggggaatacctctgaagatatgaat
ctacaaacaaactccacctaccgagatgacctgaagatttacattgtgacaagcaagcta
cacctccaccgagtagatgagccagtcttcatcagctgtgactctaaaaatctcttaggg
acagattcgcagaacatcactctggtcccacacaatttgtcctttaaagtgatcatcatc
tcagttatcttggccttgctggtcctcatggttcttttcctggtgatcctcatcatcttg
tggcgaaagaaacctcgctatgaaatccgctggaaggtgattgagtcagtcagctctgat
ggacatgaatatatctatgtggatcccatgcagcttccttatgactctagttgggaagtt
cctagagataagcttgtactagggcgcactctgggctctggggcctttggacgtgtggtg
gaagcaatagctcacagcctcagccattctcaatccaccatgagggttgctgtgaaaatg
ctgaagtctactgcacgaaccagtgaaaaacaagcacttatgtcggaactgaagatcatg
agtcaccttgggcctcatctgaacattgtcaacctgcttggtgcctgcactaaaggaggt
cctgtctacatcataacagaatactgccgctatggagacttggtggactatttgcacagg
aacaagcacacgtttctacagtgctgcaccgagaaagcgaaacaggagacagaggtgtat
gggaatgcccccaatgagaccagagtgcagagccatacatccttatccgtggaaagtgac
gggggctacatggatatgagtaaggatgagtccttggattatgtgcccatgtcagacatg
aaaggtgaaataaagtatgtggacattgattcctccaattatggtgccacatatgagctg
ggcacctattcaccagcagtttctgaaaaggtgacattgataaatgagtctcctatcctc
agctacacagatcttgttggagttagcttccaagtggccaatgggatggaattcctagct
tcaaaaaattgtgtgcaccgagacctggctgcaagaaatgttttgatctgtgagggaaag
ctggtgaagatctgtgactttggtctagcaagagatatcatgcgggattcaaattacatc
tccaaaggcaataccttcttacccttgaaatggatggcacctgagagcatcttcaataac
ctgtacactaccttgagtgatgtgtggtcctttgggatccttctatgggaaatattcact
ctgggcgggactccatatcctgaactgcccatgaatgaacaattctacaatgccattaaa
cgtggttaccggatgtccaagccaactcacgcttctaatgaaatctatgaaatcatgcag
aaatgctgggaggaaaaatttgagatcagaccgtctttctctcagctggtggtactctta
gggaatctgctgacagacacctataagaagaggtatcaacaggttagtgaagaattcttg
aagagtgaccaccctgctgttctgaggacaaggcccaggaatatgggactcaacaattcc
agctccactgccaactctaatgccagttcaagctatgttctctatactgctgtagagcag
aatgaactagataatgattacatcattcctttgcctgatcctaaaccagagggagccagc
gacaaccctcaggaggcctccagcagtcgggcaagttctacactgaatgaagcaaataca
tcatctactctatcctgcgacagccctctatcccagcagcaagatcaagaagaacaagaa
gaacaagaactaaagcctgagtgctag
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