Sceloporus undulatus (fence lizard): 121923103
Help
Entry
121923103 CDS
T07740
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04010
MAPK signaling pathway
sund04020
Calcium signaling pathway
sund04510
Focal adhesion
sund04518
Integrin signaling
sund04540
Gap junction
sund04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121923103 (PDGFRB)
04020 Calcium signaling pathway
121923103 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
121923103 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121923103 (PDGFRB)
04540 Gap junction
121923103 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
121923103 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sund01001
]
121923103 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sund04090
]
121923103 (PDGFRB)
Enzymes [BR:
sund01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121923103 (PDGFRB)
Protein kinases [BR:
sund01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121923103 (PDGFRB)
CD molecules [BR:
sund04090
]
Proteins
121923103 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
C2-set_2
VEGFR1-3_N_Ig-like
Adeno_E3_CR1
VEGFR-1-like_Ig-like
V-set
TM_ErbB1
HEF_HK
Motif
Other DBs
NCBI-GeneID:
121923103
NCBI-ProteinID:
XP_042309160
LinkDB
All DBs
Position
2:91823880..91945396
Genome browser
AA seq
1068 aa
AA seq
DB search
MLISLFLFITGLLRISSLEISPKDHEVILSLYSDFTLTCSGQNEVFWRKDGKHDIVDAIL
EEKGGTFFSTLTLRNVTGFYTGEYSCNYAQSSEGKAIYIFVPDPSLPFLPSTQEDVFVFS
TGHGEDIIPCRVTDPNTTVNLYEKKVNDPLLGTYYPQQGFKGYFEDTTYTCRATIDEQEF
DSESYYVYSIQVSSSPTSTINISISALQTVVKHGENISVTCAVRGIELINYTWSYPGQKV
GKMVEPVTDFVAGIRHYSNSTLTIHNAELGDEGLYVCEATDTYHGQKETQDIYIRVIDHG
FVTFHTVMNDTVFAELHKSHIFHVQIEAYPSPTITWFQNNQPLNSGSNSEFAITSKNLSE
TRYQTILTLVRVKQSEGGLYTVRAFHNDDSKDLSFYLQINVPAKVTDLRENSNTTSGEQT
VTCITEGMPQPEITWYTCNDIKRCDGGATKILGNTSEDMNLQTNSTYRDDLKIYIVTSKL
HLHRVDEPVFISCDSKNLLGTDSQNITLVPHNLSFKVIIISVILALLVLMVLFLVILIIL
WRKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGRTLGSGAFGRVV
EAIAHSLSHSQSTMRVAVKMLKSTARTSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG
PVYIITEYCRYGDLVDYLHRNKHTFLQCCTEKAKQETEVYGNAPNETRVQSHTSLSVESD
GGYMDMSKDESLDYVPMSDMKGEIKYVDIDSSNYGATYELGTYSPAVSEKVTLINESPIL
SYTDLVGVSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYI
SKGNTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK
RGYRMSKPTHASNEIYEIMQKCWEEKFEIRPSFSQLVVLLGNLLTDTYKKRYQQVSEEFL
KSDHPAVLRTRPRNMGLNNSSSTANSNASSSYVLYTAVEQNELDNDYIIPLPDPKPEGAS
DNPQEASSSRASSTLNEANTSSTLSCDSPLSQQQDQEEQEEQELKPEC
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctccttgttcctctttatcacaggattgttaagaatcagctctttggagatc
tctcctaaggaccatgaagtcatccttagtctctacagtgattttactctgacgtgttct
gggcagaatgaggttttctggagaaaggatggcaaacatgacatagtagacgctatccta
gaggaaaagggtggcactttttttagcacgctaacactaaggaacgtgactggattctac
acgggcgagtattcctgtaattatgctcagtcttcagagggaaaagccatctacattttt
gtaccagacccctcattgccattcctgccaagcacacaggaagatgtatttgtttttagc
actggccatggggaggacattattccatgtcgtgtgacagaccccaacactacagtgaat
ctatatgaaaagaaggttaatgacccactccttggcacttattacccacaacagggcttt
aagggatactttgaagacacaacctacacctgcagggcaaccatagatgagcaggagttt
gattctgaatcatactatgtctatagtatccaagtttcttcttcacctacctccactatc
aacatttctatcagtgcattgcaaactgttgtgaagcacggtgaaaatatatctgtcaca
tgtgcagtgagaggtatcgaactgataaattacacctggagctacccaggccaaaaagta
ggcaagatggttgaaccagtgacagattttgtagcagggatccgccactattctaattcc
acgctaaccatccacaatgctgagctgggagatgaagggctgtatgtttgtgaggccact
gatacctatcatgggcaaaaagaaacacaagacatctatatcagagtgattgatcatgga
tttgtgactttccacactgttatgaatgacactgtgtttgctgaactgcacaagagccac
attttccatgtgcagattgaggcctatccaagcccaacaatcacctggtttcagaataat
caacctctgaactcagggagcaacagtgagtttgccatcaccagcaagaatttgtcggaa
accaggtatcaaaccattctaaccctcgtaagagtgaaacagagtgaaggaggcttatac
actgtccgagctttccataatgatgactcgaaggacctgtccttttacttgcagattaat
gtcccagctaaagtgacagacctgagagaaaacagcaacaccaccagtggggagcaaaca
gtgacctgtattacagaaggaatgccccagccagagattacgtggtatacctgtaacgat
ataaaacggtgtgatgggggagccaccaaaatcctggggaatacctctgaagatatgaat
ctacaaacaaactccacctaccgagatgacctgaagatttacattgtgacaagcaagcta
cacctccaccgagtagatgagccagtcttcatcagctgtgactctaaaaatctcttaggg
acagattcgcagaacatcactctggtcccacacaatttgtcctttaaagtgatcatcatc
tcagttatcttggccttgctggtcctcatggttcttttcctggtgatcctcatcatcttg
tggcgaaagaaacctcgctatgaaatccgctggaaggtgattgagtcagtcagctctgat
ggacatgaatatatctatgtggatcccatgcagcttccttatgactctagttgggaagtt
cctagagataagcttgtactagggcgcactctgggctctggggcctttggacgtgtggtg
gaagcaatagctcacagcctcagccattctcaatccaccatgagggttgctgtgaaaatg
ctgaagtctactgcacgaaccagtgaaaaacaagcacttatgtcggaactgaagatcatg
agtcaccttgggcctcatctgaacattgtcaacctgcttggtgcctgcactaaaggaggt
cctgtctacatcataacagaatactgccgctatggagacttggtggactatttgcacagg
aacaagcacacgtttctacagtgctgcaccgagaaagcgaaacaggagacagaggtgtat
gggaatgcccccaatgagaccagagtgcagagccatacatccttatccgtggaaagtgac
gggggctacatggatatgagtaaggatgagtccttggattatgtgcccatgtcagacatg
aaaggtgaaataaagtatgtggacattgattcctccaattatggtgccacatatgagctg
ggcacctattcaccagcagtttctgaaaaggtgacattgataaatgagtctcctatcctc
agctacacagatcttgttggagttagcttccaagtggccaatgggatggaattcctagct
tcaaaaaattgtgtgcaccgagacctggctgcaagaaatgttttgatctgtgagggaaag
ctggtgaagatctgtgactttggtctagcaagagatatcatgcgggattcaaattacatc
tccaaaggcaataccttcttacccttgaaatggatggcacctgagagcatcttcaataac
ctgtacactaccttgagtgatgtgtggtcctttgggatccttctatgggaaatattcact
ctgggcgggactccatatcctgaactgcccatgaatgaacaattctacaatgccattaaa
cgtggttaccggatgtccaagccaactcacgcttctaatgaaatctatgaaatcatgcag
aaatgctgggaggaaaaatttgagatcagaccgtctttctctcagctggtggtactctta
gggaatctgctgacagacacctataagaagaggtatcaacaggttagtgaagaattcttg
aagagtgaccaccctgctgttctgaggacaaggcccaggaatatgggactcaacaattcc
agctccactgccaactctaatgccagttcaagctatgttctctatactgctgtagagcag
aatgaactagataatgattacatcattcctttgcctgatcctaaaccagagggagccagc
gacaaccctcaggaggcctccagcagtcgggcaagttctacactgaatgaagcaaataca
tcatctactctatcctgcgacagccctctatcccagcagcaagatcaagaagaacaagaa
gaacaagaactaaagcctgagtgctag
DBGET
integrated database retrieval system
