Sceloporus undulatus (fence lizard): 121928746
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Entry
121928746 CDS
T07740
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04514
Cell adhesion molecules
sund04520
Adherens junction
sund04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121928746 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121928746 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121928746 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sund01009
]
121928746 (PTPRF)
Enzymes [BR:
sund01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121928746 (PTPRF)
Protein phosphatases and associated proteins [BR:
sund01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121928746 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Tc-R-P
PTP-SAK
Interfer-bind
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Insulin_TMD
ICAM_N
Fn3_PTPRU
Egh16-like
TMEM154
DUF3377
Motif
Other DBs
NCBI-GeneID:
121928746
NCBI-ProteinID:
XP_042319828
LinkDB
All DBs
Position
4:71780201..72361599
Genome browser
AA seq
1915 aa
AA seq
DB search
MVPNFSIPAYVVPAVILCCLMSSMEADNKPNFMKTPEDQIGISGGVASFVCQATGDPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVLRDEAIYECMATNSVGEINTSAKLT
VLEENQIPSGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTAASNGR
IKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVSPRFSIP
PSNHEVMPGGSVNLTCVAVGSPMPYVKWIAGDVELTKEDDMPMGRNVLELTNITQSANYT
CEAMSSLGVIHATAQITVKALPKPPIDTLVTETTATSVTLTWDSGNADPISYYVIQYKPK
SLEGTFQEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRSPPSELVEARTGEQAPSSAP
LKVQARMLSASTMLVQWEQPEEPNGLIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGS
LITGTTYSIRVLAFTSVGDGPPSEIIQVKTQQGVPAQPADFQAEAESDTRIMLTWLPASQ
ERITKYELVYWEAADGVQHKVEFDQTSSYAVEGLKPDTLYKFQLGARSELGLGVYTPVLE
ARTAQSTPSAPPQEVVCVSTSSTAIRVSWVPPPAQSRNGVITQYSIAYQAVEGEDITKHV
VEGIGHEHSSWEISDLEKWTEYKVWVRAHTDVGPGPESIPVWVRTDEDVPGAPPRKVEVE
SMNSTAIRVSWKSPISNKQHGQIRGYQVTYVKMENSEPVGPHLIKDVVVAESQLRFKDSA
DHETIIGGLLPETTYSVSIAAYTTKGDGARSKAKVITTTGAVPGKPTMMISTTSMNTALI
NWHPPKEMIGELLGYMLQYKRADEEKMTVIQFGKNDDHHTVTGLYKGATYIFKLSAKNRA
GPGEEFEKEITTAEEVPTGFPQNLRVVGLTTSTTKVTWYPPLLAERNGKITNYTVVYRDI
NSQQNLTNVTKETSITLANLKPDTTYDIKVRAHTSKGAGPLSPSIQSRTMPMEQVFAKNF
RVSAVMKTSVLLSWEVPESYKSAVPFKILYNGQTVEVDGHSMKKLINDLQPDTNYSFALT
NRGSSAGALQHRVFIRTAPDVLQNKPVSTYKYIHNGQFTLTLPRVKTAVPVRWYYIVVVP
MDPTSNILASKMRTPDEMELDQLLEAINEGGPDRRQRRQAEHKPYIAAQVEDLPETFVLG
DEKKYNGFYNKPLSEDLSYRCFVLASLEDGDTKKYAASPYSDEIVMEVSAKQQDEPEMLW
VMGPVLAVILIIIIVIAILLFKRKRANSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQT
PGASGPSCPNLSSMRDHPPIPVTDLSDNIDRLKANDGLKFSQEYESIDPGQQFTWENSNL
EVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLS
DFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPGRGTETYGLIQVTLLDTVELATYTVRT
FALYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPVVVHCSAGV
GRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGN
TEVPARNLFAHIQKLSQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVN
IMPYELTRVCLQPIRGLEGSDYINASFVDGYRQQKAYIATQGPLAETTEDFWRMLWEHNS
TIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQS
RTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITL
SIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttcagcatcccagcatatgttgtgccagcagtaattctgtgctgcttg
atgtcatcaatggaggcagacaacaagccaaacttcatgaaaactcctgaggatcagatc
gggatttctggaggtgtggcctcctttgtatgccaagcaacaggagatccaaagccacgc
atcacatggatgaaaaagggaaagaaggtcagctcccaacgatttgaagttattgaattt
gatgatggctctggatcagttctgcgtattcagcctctgcgtgtcctgcgggatgaagca
atctacgaatgcatggccacaaatagtgttggggagataaacactagtgccaaactgaca
gtgctagaagagaaccagatcccctccggctttccaaccatagacatgggcccacagctc
aaggtagtagaaaaggcccgcactgctacaatgctttgtgctgccagcggcaaccctgac
cctgaaatctcctggttcaaagacttccttcccgtggacacagctgctagcaatgggaga
atcaaacagctccgttcaggtggtacaccaatcagaggggccctgcagattgagaacagt
gaagagtcggaccaaggaaaatatgaatgtgttgccacgaacagtgcagggacccgttat
tcagctccagccaacctttatgtgcgagtgcgacgagtatcacctcgattttcaatccct
ccaagcaaccatgaggtgatgcctggagggagcgtgaacctcacatgtgtagcagtgggg
tccccaatgccctatgtaaagtggattgctggagatgtggaactgacaaaagaagatgac
atgccaatgggcaggaatgttctagagctgaccaatatcacccaatcagccaactatacc
tgcgaagcaatgtcttcactgggcgtaattcatgcaacagcacagatcactgtaaaagcc
ctgccaaagccaccaatagacacattagtgactgagacaacagccaccagtgtaactctc
acctgggattcaggaaatgctgaccctatctcctactatgtcattcagtataagcctaag
tctttggagggcactttccaagaagtggatggtgtggcaaccacccgctacagcataggt
ggcctaagccccttctcagaatatgagttccgtattattgctgtaaacaacattggcaga
agtcctccaagtgaactggttgaagcaagaacaggagagcaagccccatcaagtgcacct
ctgaaagtgcaggcacggatgctgagtgccagcaccatgctggtgcagtgggaacagcct
gaggagcccaatggcctgatccggggctatcgagtatattacaccactgatccccacctg
ccactcagcatgtggcaaaagcacaatactgatgacagccatctcactactgtgggcagc
ttgataactgggaccacttatagtatccgtgtcttggctttcacttccgttggtgatgga
cccccttctgaaatcatccaggtcaaaactcagcagggtgttccagcccagccagctgac
ttccaagctgaggcagagtctgacacacggatcatgctgacttggctgccagcctctcag
gaacgaatcaccaagtatgagctggtgtactgggaagcagctgatggggtccagcataaa
gtggagtttgaccagacctcatcatatgcagttgaaggactcaaaccagacacactctac
aagtttcagctgggagcccgctctgaactgggcctgggagtctatacaccagttttggaa
gcccgtacagcacagtccaccccttctgccccaccccaagaggtcgtatgtgtaagcacc
agctccaccgccatccgggtaagttgggtaccaccaccggctcagagccgcaatggagtc
atcacacagtattccatcgcataccaggcagtggaaggagaggacatcaccaagcatgtg
gttgagggcattggacatgagcattccagctgggagatcagcgacttggagaaatggacc
gagtataaagtgtgggtgagggctcacacagatgtgggtcctgggccagagagcatccct
gtctgggttcgcactgacgaagatgtgcctggtgctccaccgcggaaagtagaagttgag
tcaatgaactcaacagccattcgtgtctcctggaagtcacccatctccaacaagcaacat
ggccaaatccgaggctaccaagtcacatatgtgaagatggagaacagtgagccagttgga
ccacatctcattaaagatgttgtggtagcagaatcccagttgaggtttaaggactctgct
gaccacgaaacgatcataggaggccttttacctgaaactacctattctgtcagcattgca
gcctacaccactaaaggggatggggccagaagcaaggccaaggtgattaccacaactgga
gcagtcccagggaaacctaccatgatgatcagcaccacatctatgaatacagccctaatc
aattggcatccacccaaagagatgattggagagctactgggctacatgctacaatacaaa
cgtgctgatgaggagaagatgacagtcattcagtttgggaagaacgatgatcaccacact
gtgactggcctttacaagggtgccacctacatcttcaagctgtctgccaagaatagagct
ggtcctggggaggagtttgagaaggaaatcactactgcagaggaggtgccaactggcttt
ccccagaacctgcgtgttgtgggccttaccacttctaccactaaagtgacctggtatcca
ccactgctggctgagaggaatggaaaaataaccaactatacggttgtctacagagacatt
aacagccagcagaacctgactaatgttactaaggaaacaagcatcactctggccaacctc
aaacctgacacaacttatgacatcaaagttagagcccatactagtaagggagctggacct
ctcagccccagcattcaatctaggacgatgccaatggaacaagtgtttgcaaagaacttc
cgtgtcagtgctgtgatgaaaacatcagtgctgctgagctgggaggtgccagagtcttac
aaatctgcagtacctttcaagattctgtacaatggtcagactgtggaggtggatgggcac
tccatgaagaagctgattaatgacctgcagcccgacacaaattactcctttgcactcaca
aaccgggggagcagtgcaggggcactgcagcaccgggtcttcatccggacagcacctgat
gtcctccagaacaagcctgtctccacatataaatatatccataatggacagtttactctc
actcttcccagagtgaagactgctgtgccagtcaggtggtattatattgtagttgtgcca
atggaccctacaagcaacatacttgcctccaaaatgaggaccccagatgagatggaactg
gaccagctgcttgaggccataaatgaagggggccccgacagacgccagcgtcggcaggca
gaacacaagccctacatcgctgcccaagtggaggatctgccagagacatttgtcttagga
gatgagaagaagtacaatggcttctataataagccactttcagaagacttgagctaccgt
tgttttgtgctagcttcactggaggatggtgatacgaagaagtatgcagccagtccttat
tcagatgagattgtgatggaggtatcagcaaaacagcaagatgaaccagagatgctgtgg
gtgatgggtcctgtcctggctgtcatcttaatcatcatcattgtcattgcaattctgctc
ttcaaaaggaaaagggccaattcaccttcttccaaggatgagcattctattggcctgaag
gactccttgctggcccattcttctgatccagttgaaatgaggcgactcaattaccaaaca
ccaggtgccagtggccccagttgcccgaatctctcaagcatgcgtgaccaccctcccatt
ccagtgacagatctctctgacaacatcgaccgtctgaaggccaacgatgggctgaagttc
tcccaggaatatgagtccattgatcctggacagcaattcacatgggagaactccaacttg
gaagtgaacaaaccaaagaaccgctatgcaaatgtgatagcctatgaccactctcgtgtc
atcctgacctcaattgatggggtccctggaagtgactacatcaacgccaactacattgat
ggctaccgcaagcagaatgcctacatcgctacacaagggcctttgccagaaacactcagt
gacttctggaggatggtgtgggaacagcgcacggcaactattgtgatgatgacccggtta
gaggagaagtctcgggtaaagtgtgatcaatattggccagggcgtggtacagagacatat
ggcttgatccaggtgacattgctggacacggtcgaacttgcaacttacacagttcggaca
ttcgccctatataagaatgggtctagtgaaaaacgagagctgcggcagttccagtttatg
gcttggcctgaccacggtgtgccagagtacccaactcctattctggctttcctgagacgg
gtaaaagcctgcaatcccccagatgctggcccagtggttgtacactgcagtgctggtgtg
ggcaggacaggctgtttcattgtaattgatgccatgcttgagaggatgaagcacgagaag
acagttgacatctatgggcatgtgacatgcatgcgttcacagagaaactatatggtgcag
accgaagaccagtatatcttcatacatgaggccttgcttgaagcagccacctgtggaaac
actgaagtgcctgcacgcaacctctttgctcacatccagaaactgagtcaggtacctcca
ggcgagagtgtaacagcaatggagctggagtttaagctccttgccaactctaaagcacat
acctcacgattcatcagtgccaacctcccatgcaacaaatttaaaaatcgtctggtgaat
atcatgccctatgagctgacacgagtttgtctgcagccgatccggggcctcgagggctca
gattatatcaatgccagctttgtagatggctacaggcagcaaaaggcctacattgccaca
cagggccccctagctgagaccacagaggacttctggcggatgctgtgggagcacaactcc
acaattgtggtgatgctgaccaagctgcgagagatggggagggagaagtgccatcagtac
tggccagccgagcgctctgctcggtaccaatacttcgtggtggatcccatggctgaatac
aacatgcctcagtacattttgcgagagttcaaggtcactgatgccagagatgggcaatca
agaaccatccggcagttccagttcactgactggcctgagcagggagtaccaaaaacaggc
gagggcttcattgacttcattgggcaagtccataaaaccaaggagcaatttggccaggat
gggcccatcactgtacactgcagtgcgggggttggacgcactggagtattcatcacatta
agcattgtcttggagcgcatgcgctatgaaggtgtagttgacatgttccagactgtgaag
accctgaggacacagcgaccagccatggtgcagacagaggaccagtaccagttgtgctac
cgagctgcactggagtaccttggcagctttgatcactatgcaacgtaa
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integrated database retrieval system
