Sceloporus undulatus (fence lizard): 121929146 Help Entry 121929146         CDS       T07740                                  Symbol THBS1 Name (RefSeq) thrombospondin-1 isoform X1   KO K16857   thrombospondin 1 Organism sund  Sceloporus undulatus (fence lizard) Pathway sund04115   p53 signaling pathway sund04145   Phagosome sund04148   Efferocytosis sund04350   TGF-beta signaling pathway sund04510   Focal adhesion sund04512   ECM-receptor interaction sund04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sund00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     121929146 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121929146 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     121929146 (THBS1)    04148 Efferocytosis     121929146 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     121929146 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     121929146 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     121929146 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sund04131]     121929146 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sund00536]     121929146 (THBS1) Membrane trafficking [BR:sund04131]  Endocytosis   Phagocytosis    Opsonins     121929146 (THBS1) Glycosaminoglycan binding proteins [BR:sund00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121929146 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF EGF TSP1_ADAMTS TSP1_CCN Motif Other DBs NCBI-GeneID:  121929146 NCBI-ProteinID:  XP_042320394 LinkDB All DBs Position 1:complement(323083072..323105867) Genome browser AA seq 1176 aa AA seqDB search MELPGGLFLLLMLGVHASNRIPEPGDDNSVFDLFELIGFGRKGAARKAAGVHPVKGPEIS SPAYRIDDANRIPAIPDHKFQDILYAIQAEKGFILLANLRPVKKSPGTLLAVERKDNSGH VFKLVLNGKAKTLDLSIFPKEGNQSLVSVEDVELPHAQWNNITLLVQEDQAQLYVGCEKM VNAELEIPIQNIFTRDLASSARLRIAKGGFNDNFQGMLQNVRFVFGTTVETILRNKGCES STRTIIKLDNPINGSRPAIRTNYIGHKTKDIQAICGFSCDELTNVFVELQSLRALVTTLQ DSVHKVNGLMEFVGGPFKISPGACLHNQVVYQNTAEWTTDSCTTCTCQNSVVICHKVSCP LMPCSNATVPDGECCPRCWLSDSAEDIWSPWSEWTTCSATCGNGIQQRGRSCDRINHRCE GSSVQTRICNMQECDKRFRQNGAWSHWSPWSSCSVTCGSGVITRIRLCNSPLPQMGGKEC EGEARENMPCEKSPCPINGNWGPWSPWDTCPVTCGGGVQKRGRLCNNPEPQYGGKDCIGE AFDNQICNKQDCPIDGCLSNPCFAGTTCTSFPDGSWKCGACPAGYHGNGVKCKDVDECKE VPDACFVLSGVHRCENTEPGYHCLPCPPRFTGTQPFGRGVENAIANKQVCKPRNPCTDGT HDCNKHARCIYLGHFSDPMYRCECKPGYAGNGNICGEDTDLDGWPNENLVCVANATYHCT KDNCPNLPNSGQEDYDKDGIGDACDSDDDNDNIPDDRDNCPFIYNPQQYDYDRDDVGDRC DNCPYNHNPDQIDTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQKDTDLDGVGDQCD NCPMEHNPDQTDSDSDRIGDKCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC DHDDDNDGIPDDKDNCRLVANPDQLDSDGDGRGDACKDDFDKDNVLDIDDICPENVDISE TDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI NTERDDDYAGFVFGYQSSSRFYVVMWKQVTQTYWDIEPTKAQGYSGLSIKVVNSTTGPGT HLRNALWHTGNTAGQVRTLWHDPRHTGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atggagttgccaggcggcctctttctcctcctgatgcttggcgtccacgcgagcaaccgg atcccagagcctggggatgataacagtgtttttgatctctttgaactaattggctttggt cgcaagggagcagcccggaaggcggcaggggtacaccctgtgaagggaccagagatttcc agccctgcctaccgcattgatgatgccaatcgtatccctgcaatccctgaccacaaattc caagacattctttatgccatccaagctgaaaagggcttcattctattagctaaccttcgt ccagtgaagaagagccctggcaccctgctggctgtggagcgcaaggacaattctggccat gtgtttaagctcgtcttgaatggcaaggctaaaaccttggatttgagtatctttcccaag gagggtaaccagtctctggtgtcagtggaggatgttgagttgccccacgcacagtggaac aacatcaccctcttagtccaagaagatcaagctcagctgtatgtgggatgtgaaaaaatg gtgaatgctgaattggaaatccctatccagaatatcttcaccagggacctggcaagcagt gccagactccgcattgcaaaaggaggattcaatgacaactttcagggaatgctgcagaat gtgcgctttgtatttggaaccacagtagaaactatccttaggaacaaaggctgtgagagt tctactaggaccatcattaagttggacaatcccattaatggttcccgcccagccattcgc acaaactacattggccataaaacaaaagacatccaggcaatctgtggattctcctgtgat gaactcaccaatgtgtttgtagaactgcaaagcttacgagccctggttacaacacttcaa gattcagtccacaaagtgaatggtctcatggaatttgttggtggtccatttaaaataagt cctggggcatgccttcataatcaagttgtgtaccaaaatacagctgaatggaccactgat agctgcactacatgtacttgccagaattctgtcgttatctgtcataaagtatcttgccct cttatgccttgttccaatgccactgttcctgatggagaatgctgcccaagatgttggctc agtgattctgcagaagatatttggtctccttggtccgagtggacaacttgctcggcgaca tgtggcaatgggatccagcagagaggacgttcttgtgacagaatcaaccatcgctgcgaa ggctcctctgtccaaacacgaatctgcaatatgcaagagtgtgataagagattcagacag aatggtgcctggagccattggtccccttggtcgtcctgttctgtgacttgtggaagtgga gtgattactagaatccgtctgtgcaactctcctcttcctcagatgggtggcaaagagtgt gaaggagaagcaagagaaaacatgccttgcgagaaaagcccttgcccaatcaatggcaac tggggaccatggtcaccatgggatacctgtccagtcacatgtggagggggtgtccagaag cgtggccgtctctgcaacaatcctgagccccagtatggagggaaggattgtataggtgaa gcatttgacaaccagatctgcaacaagcaggattgcccaattgatgggtgcctctctaac ccttgctttgcgggaacaacatgtactagttttcctgatggttcctggaaatgtggtgct tgccctgctggctatcatggaaatggagtcaaatgcaaagatgttgatgagtgtaaggag gttccagatgcttgctttgtcttgagtggagtgcacaggtgtgagaatactgagcctggg taccactgcctgccttgcccaccacgttttactggaacacagccctttggacgaggagtg gagaatgcaatagcaaacaagcaggtctgcaaaccacgtaatccatgtactgatggaact catgactgcaacaagcatgcccggtgcatttaccttgggcacttcagtgatcccatgtat cgctgtgaatgtaaaccaggctatgctggtaatggcaatatctgtggagaagacacagat ttagatggatggccaaatgagaaccttgtctgcgttgccaatgctacttaccattgcact aaagataactgcccaaaccttcccaactctggacaggaagattatgataaagatggaatt ggtgatgcttgtgacagtgatgatgataatgacaatattccagatgacagagacaactgc ccattcatttataatccacagcagtatgactatgatagggatgatgttggtgatcgctgt gataactgcccttacaatcacaatcctgaccagatagatacagataataatggagaagga gatgcttgtgctgtggatattgatggcgatggcattcttaatgaaagagacaactgtcag tatgtgtacaatgttgatcagaaagatacagacttggatggtgttggtgatcagtgtgac aactgtcctatggaacacaatcctgatcagacggattccgactctgaccgtataggtgac aaatgtgatagcaaccaggacattgatgaagatggccatcaaaataaccttgataactgc ccatatgtgcccaatgctaatcaggctgaccatgacaaagatgggaaaggtgatgcctgt gaccatgatgatgataatgacggcatcccagatgataaagataattgcagactggttgcc aacccagaccaacttgattctgatggtgatggacgtggagatgcatgtaaagatgacttt gacaaagataatgttctagacattgatgacatctgcccagagaatgttgatatcagtgag acagacttccgtcgatttcaaatgattcccttggatcctaagggaacatctcaaaatgat ccaaactgggtcgttcgtcatcaaggcaaagaactggttcagactgtcaactgtgatcct ggacttgcagttggttttgatgaatttaatgctgttgatttcagtggtacattcttcatt aatacagaaagggatgatgactatgcaggctttgtgtttggatatcagtccagcagtcgt ttttatgtagtcatgtggaaacaagtgacccagacttattgggatatagaaccaaccaaa gctcaaggatattcaggactttctatcaaagtagtaaattccaccacagggcccggaaca caccttcgtaatgcactgtggcacactggaaatactgctgggcaggtgcggactctgtgg catgatcctcgtcacacaggctggaaagatttcactgcctacagatggcgtctcagtcac agaccaaagactggttacattcgggttgtaatgtacgaaggaaagaaaatcatggctgat tctggccccatttatgacaaaacctatgctggcggtcggttaggattatttgttttctct caagaaatggtgttcttctcagatcttaaatatgaatgtagagatccatga

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